Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1440 ATGGCCGGAAAAGGAGAGGGTCCTGCTATCGGAATCGATCTCGGAACCACCTACTCTTGCGTCGGTGTGTGGCAACATGACCGCGTTGAAATCATCGCCAACGACCAGGGGAACAGAACCACGCCGTCTTACGTCGGATTCACTGACACCGAGCGTCTCATCGGTGATGCGGCCAAGAATCAAGTCGCCATGAACCCCATCAACACCGTCTTCGATGCCAAGAGGTTGATTGGTCGTAGATTCAGTGATTCCTCTGTTCAGAGTGATATCAAATTGTGGCCTTTCAAGGTCATTCCTGGTGCTGCTGACAAGCCAATGATCGTGGTTAACTACAAGGGTGAAGAGAAGCAATTTGCCGCAGAAGAAATCTCTTCCATGGTGCTCATCAAGATGCGTGAGATTGCTGAGGCTTACCTAGGCTCCACAGTGAAGAATGCTGTTGTCACCGTCCCTGCTTACTTCAATGATTCTCAGCGTCAAGCTACCAAAGACGCTGGTGTCATTGCTGGTCTAAATGTGATGCGAATTATCAATGAGCCTACTGCAGCTGCCATTGCATATGGTCTTGATAAGAAGGCCACGAGTGTTGGTGAGAAGAATGTGTTGATTTTTGACCTTGGTGGTGGGACATTTGATGTGTCTTTACTCACCATTGAGGAGGGTATCTTTGAGGTGAAAGCCACTGCTGGTGACACCCATCTTGGAGGTGAAGATTTTGATAACAGGATGGTGAACCACTTTGTTCAAGAGTTCAAGAGAAAGAACAAGAAGGACATTAGTGGAAACCCCAGAGCACTTAGAAGGTTGAGGACTGCTTGTGAGAGGGCCAAGAGAACACTTTCATCGACTGCTCAGACCACCATTGAAATTGATTCTCTATACGAGGGAATTGATTTCTACTCCACTGTTACTCGTGCCAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAATGTATGGAGCCGGTGGAGAAATGTTTGAGGGATGCTAAGATGGACAAAAGAAGTGTTGATGATGTTGTCCTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAACAACTGCTGCAGGACTTCTTTAATGGAAAAGAGCTTTGCAAGAGCATTAATCCCGATGAGGCTGTTGCATATGGTGCTGCTGTTCAGGCTGCAATCTTAAGTGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTCCTGGATGTCACCCCTCTGTCTCTTGGTTTGGAGACTGCCGGTGGTGTGATGACTGTCCTGATCCCTAGGAACACTACAATTCCAACAAAGAAGGAACAAGTTTTCTCAACATACTCTGACAACCAGCCTGGTGTGCTTATCCAGGTCTTTGAGGGTGAAAGAGCAAGGACCAGAGATAACAATTTGTTGGGCAAATTTGAGCTATCTGGCATTCCTCCTGCACCCAGGGGTGTTCCTCAGATTACAGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGATAAAACCACTGGCCAGAAAAATAAGATCACTATCACCAATGACAAGGGTAGATTGTCAAAGGAAGATATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAGTCTGAGGATGAAGAGCACAAGAAGAAGGTTGAGGCCAAAAACGCTTTGGAAAACTATGCATACAACATGAGGAACACCGTGAAGGATGACAAGATTGGTGAGAAACTTGACCCGGCTGACAAGAAGAAGATTGAGGATGCAATTGAGCAGGCAATCCAGTGGTTAGACAGCAACCAGCTTGCAGAAGCAGATGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAATCCAATCATTGCCAAGATGTACCAAGGTGGTGCTGGTCCAGACGTGGGTGGTGCTGGTGCAGCAGAGGATGAGTATGCTGCTCCTCCTTCTGGTGGAAGTGGTGCTGGCCCCAAGATTGAGGAAGTGGACTAA 1962 0.4704 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGAADKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTVTRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDDKIGEKLDPADKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDVGGAGAAEDEYAAPPSGGSGAGPKIEEVD* 654
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1440 653 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Gso3g1440 653 Gene3D Actin; Chain A, domain 4 235 318 - -
Gso3g1440 653 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Gso3g1440 653 Coils Coil 521 541 - -
Gso3g1440 653 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Gso3g1440 653 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Gso3g1440 653 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 8 21 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 36 48 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 58 66 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 146 166 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 209 219 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 337 353 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 369 389 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 396 415 - -
Gso3g1440 653 PRINTS 70kDa heat shock protein signature 477 493 - -
Gso3g1440 653 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Gso3g1440 653 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Gso3g1440 653 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Gso3g1440 653 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Gso3g1440 653 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Gso3g1440 653 Gene3D - 546 619 IPR029048 -
Gso3g1440 653 MobiDBLite consensus disorder prediction 619 653 - -
Gso3g1440 653 Gene3D - 192 366 - -
Gso3g1440 653 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Gso3g1440 653 Gene3D - 71 126 - -
Gso3g1440 653 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Gso3g1440 653 Gene3D - 10 384 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso3g1440 Gso-Chr3 40419890 40422848 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1440 1 653 Calmodulin-binding Proteins AT3G12580 91.577 0.0 1218
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1440 K03283 - gmx:100798307 1250.73
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1440 3 40419890 40422848 Gso3g1440 3 40419890 40422848 ECH
Gso19g1432 19 43229346 43232244 Gso3g1440 3 40419890 40422848 GST
Gso3g1440 3 40419890 40422848 Gso2g1751 2 41181277 41183722 PCT
Gso3g1440 3 40419890 40422848 Gso13g0999 13 24377080 24380073 PCT
Gso2g1751 2 41181277 41183722 Gso3g1440 3 40419890 40422848 PCT
Gso13g0999 13 24377080 24380073 Gso3g1440 3 40419890 40422848 PCT