Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1433 ATGGCACATCAAAACTTGGGCACCAAATTAACAGCACTTGTAGTAGATGACAATAAAATCAACCGAAAGATTCATCAAAAGCTGTTGGAGAGTGTTGGAATGAAAAATCAAGGAGTGGAAAATGGCCAAGAAGCAGTGGACATTCATTGCCATGGACAAAGATTTGACCTGATTCTCATGGACATGGATATGCCCATCATGAATGGCATTGAGGCAACAAAGGAACTTCGCTCAATGGGCATTGGTAGCATGATTGTTGGTGTATCATCACGCTGTACGGAAGCAGAAATACGAAAATTTATGGAAGCGGGACTGAATGACTACCATGAGAAACCCTTGAACAATTCTAAGCTTAGTTCACTTCTTGATAAGATCAACCCCAGTTTTACTCGTAATTAG 399 0.406 MAHQNLGTKLTALVVDDNKINRKIHQKLLESVGMKNQGVENGQEAVDIHCHGQRFDLILMDMDMPIMNGIEATKELRSMGIGSMIVGVSSRCTEAEIRKFMEAGLNDYHEKPLNNSKLSSLLDKINPSFTRN* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1433 132 SMART REC_2 10 122 IPR001789 GO:0000160
Gso3g1433 132 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Gso3g1433 132 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Gso3g1433 132 SUPERFAMILY CheY-like 9 125 IPR011006 -
Gso3g1433 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 129 - -
Gso3g1433 132 Gene3D - 2 129 - -
Gso3g1433 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 129 - -
Gso3g1433 132 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1433 Gso-Chr3 40345905 40346992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1433 10 122 Response Regulator Gene Family AT3G04280 46.957 1.22e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso3g1433 Response_reg 1.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1433 - - gmx:100794931 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1424 19 43182655 43183333 Gso3g1433 3 40345905 40346992 GST