Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1428 ATGGAGAACTTGTTTCGCCTAGTAGACAACGAAGACTTGTTCTCTCGCCGTTGCATTTGGGTGAATGGCCCTATAATCGTAGGGGCAGGACCCTCAGGGCTAGCCACAGCAGCATGCCTTAGAGAACAAGGGGTACCCTTCATGGTTCTCGAACGTGCAGATTGCATAGCCTCACTGTGGCAAAAAAGAACCTACGACAGGCTCAAACTTCACCTTCCAAAACAATTCTGCCAGCTCCCGAAACTACCCTTCCCTGAAGACTTCCCCGAATACCCCACAAAGAAACAGTTCATAGAGTACTTAGAATCCTACGCTAAGCACTTCGAGATCAACCCTCAGTTCAACGAGTGTGTGCAGTCCGCGAGGTACGACGAGACAAGCGGCTTGTGGAGGGTTAAGACCGTTTCATCCTCGAGTGGCGCGGCTCGCGGCGAGGTTGAGTACATTTGCAGGTGGCTCGTGGTGGCCACCGGGGAGAATGCCGAGTGTGTTATGCCTGAGATTGAAGGGTTGAGTGAGTTCAAAGGTGATGTGATCCATGCTTGTGATTACAAGTCAGGGGAGAGATTCAGGGGAAAGAAGGTTCTTGTTGTTGGATGTGGCAATTCCGGCATGGAACTCTCACTTGACCTTTGCAACCACCATTCTTCTCCGTCCATGGTTGTTCGTAGCTCGGTTCACGTGTTGCCTAGAGAAGTGTTTGGAATATCAACTTTTGAATTGGCGGTTATGTTGCTGCAATGGCTGCCCCTTTGGCTTGTTGACAAGATTCTCTTGATCTTGGCATGGTTTGTTTTGGGGAACATTGAGAAGTTGGGGCTCAAAAGGCCTTCAAAGGGTCCTTTGGAGATGAAGAACAGAAAGGGGAAGACCCCAGTTTTGGATATTGGTGCCTTGGAGAGGATTAGATCCGGTGACATAGAAGTGGTGCCAGGAATCAAGAGGTTCAATAATGGTGAAGTTGAGTTTATTAATGGTGAAAAGCTTGATATTGATGCAATAGTGCTTGCAACCGGTTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAGATGCCATTCCCTCATGGTTGGAAGGGAAATGCTGGACTTTATGCTGTGGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTGAAAATTGCTCAAGATATTGGCCAAGTTTGGAAAAATGAGACTAAGCAAAAGAAACAGCGCACTACTGCTTGTCATAGACGTTGCATTTCACAGTTCTAA 1275 0.4776 MENLFRLVDNEDLFSRRCIWVNGPIIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYAKHFEINPQFNECVQSARYDETSGLWRVKTVSSSSGAARGEVEYICRWLVVATGENAECVMPEIEGLSEFKGDVIHACDYKSGERFRGKKVLVVGCGNSGMELSLDLCNHHSSPSMVVRSSVHVLPREVFGISTFELAVMLLQWLPLWLVDKILLILAWFVLGNIEKLGLKRPSKGPLEMKNRKGKTPVLDIGALERIRSGDIEVVPGIKRFNNGEVEFINGEKLDIDAIVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGQVWKNETKQKKQRTTACHRRCISQF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1428 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Gso3g1428 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 214 - -
Gso3g1428 424 SUPERFAMILY FAD/NAD(P)-binding domain 25 302 IPR036188 -
Gso3g1428 424 SUPERFAMILY FAD/NAD(P)-binding domain 191 402 IPR036188 -
Gso3g1428 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Gso3g1428 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Gso3g1428 424 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 422 - -
Gso3g1428 424 Pfam Flavin-binding monooxygenase-like 26 345 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gso3g1428 424 Gene3D - 24 410 IPR036188 -
Gso3g1428 424 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1428 Gso-Chr3 40271930 40274324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1428 K11816 - gmx:100796169 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1420 19 43098392 43100610 Gso3g1428 3 40271930 40274324 GST
Gso3g1428 3 40271930 40274324 Gso10g1197 10 35951584 35954312 PCT
Gso10g0362 10 3830499 3832867 Gso3g1428 3 40271930 40274324 PCT
Gso10g1451 10 40900369 40908407 Gso3g1428 3 40271930 40274324 PCT