Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1412 ATGGCCGTCGATGAAATTGAAATCTTGTCTCCTACGTTTTCTTCTTCGGGATCGTTTGAGACCCTTTGGAGTGCGATCCTCGGATTGCCTTTGTTGGAACTGGTGGCAATTTGTGCCAACTTGACACTGTCTCTTCTCTTTCTCTTCGTTGTTTCGGCGAGGAAGGTGCTTGTGTGTGTAGGGAGAGGAGTAAGATTTGGTAAGGAGAACATAACCGGCAATGCCAGCCCCGGTTGTGTTAGTGTTGATTTGGAAACACGTGACGTCGTTCGGATTGAAACGTGGTTCAAGTTGTCGGTGTTGTCTTGTTTGTATGTTCTGTTGGTGCAAGTTTTGCTCTTGGGGTTTGATGGGGTTGCTTTGATTAGAGGAAGGGATTTGGATGTGGATTTGGATTTGGGTTTGGCTCTTCTTTCTGTGCCTCTTGTGCAGGGTTTAGCTTGGGTTGTGTTGAGCTTCTCGGCTTTGCAATGCAAGTTCAAGGCGTCTGAGAGGTTTCCAATTTTGCTCAGACTTTGGTGGGTTATGCTGTTTGGTATTTGTTTGTGTGGTTTGTATGTTGATGGTAAGGGGGTTTGGATGGAGGGTTCCAAGCACCTGCGGTCTCATGTTGTGGCGAATTTCACCATCACTCCTGCTCTTGCCTTTTTGTGTATTGTGGCAATTAGGGGTGTTACTGGTATAAAGGTTTTTAGGAATTCCGAGGAGCACCAGCCATTGCTTGTTGAGGAGGAACCGGGGTGTCTCAAGGTTACTCCTTATACTGATGCCGGACTTTTTAGCTTGGCCACTTTGTCTTGGTTGAATCCACTTCTTTCCATAGGGGCAAAAAGGCCGCTTGAGCTTAAGGACATTCCCCTTGTTGCGGCGAAAGACCGATCCAAGACAAATTATAAGGTTTTGAATTCTAATTGGGAGAGGTTGAAGGCTGAAAACCAATCCGAGCAGCCTTCCTTGGCTTGGGCACTTCTCAAGTCCTTCTGGAAGGAGGCAGCTTGTAATGCCGTATTTGCTGGTGTCACTACTCTTGTCTCGTATGTCGGTCCGTACATGATAAGTTACTTTGTTGATTACTTGGTTGGCAAAGAGATTTTCCCACATGAGGGGTATGTCCTTGCAGGGGTATTCTTTGTGGCAAAGCTTGTGGAGACCTTTACTACTAGGCAGTGGTATCTTGGGGTGGACATCTTGGGTATGCATGTTAGGTCGGCTCTAACTGCAATGGTATATCGAAAGGGGCTAAGGATATCAAGCTTGGCCAAGCAAAGTCACACGAGTGGGGAGGTTGTTAACTACATGGCTATTGATGTTCAGAGGGTAGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTTGCCCTTGCAATTTTGTATAAGAATGTTGGAATTGCTGCTATTGCAACACTGATTGCTACAATAATTTCCATCGTCGTCACTGTTCCTATTGCCAGGGTCCAAGAAAATTATCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAGTGCCTGAGGAATATGAGGATTCTCAAACTTCAAGCTTGGGAGGACAGATATAGAGTGAAATTGGAGGAAATGCGTGGAGTAGAGTTCAAGTGGCTTCGGAAAGCCCTCTATTCTCAGGCTTTCATAACTTTCATATTCTGGAGCTCCCCTATATTTGTTTCGGCGGTCACTTTTGCTACTTCCATATTGTTGGGTGGTCAGCTGACTGCTGGTGGTGTACTTTCTGCTCTGGCTACTTTCAGGATCCTGCAAGAACCTTTGAGGAATTTTCCGGACTTGGTGTCAACAATGGCTCAGACAAAGGTTTCTCTTGACCGATTATCTGGTTTCCTGCTGGAGGAGGAATTGCAGGAAGATGCAACTATTGTCTTGCCACAAGGCATTACTAACATTGCTATAGAAATTAAGGATGGTATCTTCTGTTGGGACCCTTCTTCATCTTTTAGGCCTACCCTATCAGGGATAAGTATGAAAGTTGAAAGAAGGATGCGCGTGGCTGTTTGTGGTATGGTTGGTTCAGGGAAATCGAGTTTTCTTTCGTGCATCCTTGGAGAGATTCCTAAACTTTCTGGTGAAGTTAGAGTGTGTGGCTCTTCTGCTTATGTCTCCCAATCAGCGTGGATACAATCAGGAACTATAGAAGAAAATATCCTCTTTGGAAGCCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGACCTAGAACTTTTCTCACATGGTGATCAGACAATTATTGGGGATAGAGGTATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTTCTGGATGATCCCTTCAGTGCAGTTGATGCTCACACTGGATCAGACTTGTTTAGGGAGTATATATTGACAGCACTTGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCCGCTGCTGATTTGATTCTGGTTCTTAAAGAAGGATGCATCATACAGTCAGGAAAGTATGATGATCTTTTACAAGCAGGAACAGATTTTAATACTCTGGTTTCAGCTCACCATGAAGCCATAGAGGCTATGGATATCCCTACTCACTCCTCTGAAGAGTCAGATGAAAATTTATCCCTGGAGGCATCTGTTATGACCAGTAAGAAATCCATTTGTTCAGCAAATGATATAGACAGTTTAGCAAAGGAAGTGCAAGAGGGATCATCTATTTCAGATCAAAAAGCAATTAAAGAGAAGAAGAAGAAAGCAAAACGATCGAGAAAGAAACAGCTTGTTCAGGAAGAGGAGAGGATTAGAGGTAGAGTCAGCATGAAGGTGTATCTTTCATACATGGCAGCAGCATATAAAGGCTTATTGATTCCACTCATAATCATTGCACAAACATTATTTCAGTTCCTTCAGATTGCAAGCAATTGGTGGATGGCTTGGGCTAACCCTCAAACAGAAGGAGACCTGCCCAAAGTAACTCCCTCAGTTCTTCTTCTTGTTTATATGGCCCTTGCTTTTGGCAGCTCATGGTTTATATTTGTAAGGGCTGTTCTGGTGGCTACATTTGGTCTTGCAGCTGCCCAGAAGCTATTTTTGAAAATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGGGTATCAATTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGTGGATTTGCTTCAACTACAATACAGCTTATTGGTATTGTTGGTGTAATGACAGAAGTTACATGGCAAGTTTTGCTCTTAGTTGTCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGTATTGTTAGCATACAGAAGTCTCCAATTATACATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTCTATCTTCTTGATTGCTTTGCACGACCATTCTTCTGCAGTCTTTCTGCAATTGAGTGGCTCTGCCTGCGGATGGAGTTACTGTCAACCTTTGTATTTGCTTTCTGTATGGTATTACTTGTGAGTTTTCCTCGTGGAAGTATCGACCCCAGCATGGCTGGACTTGCTGTGACATATGGCCTGAATTTAAATGCACGCCTATCACGGTGGATACTCAGCTTTTGCAAGCTTGAAAATAAAATTATATCTATTGAGAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCCACAATTATTGAAGATTCTCGCCCTCCATTCTCATGGCCAGAAAATGGGACAATTGAAATAATTGATTTGAAGGTCCGTTACAAGGAGAATCTTCCTATGGTGCTTCATGGAGTAACATGCACATTTCCAGGTGGAAAGAAGATTGGAATAGTTGGACGTACTGGCAGTGGAAAATCTACTTTAATTCAGGCGTTATTTCGATTGATTGAACCAGCAAGTGGGAGTATCCTTATAGACAACATTAATATTTCAGAGATTGGCCTTCATGACCTTCGAAGCCATCTCAGTATCATACCTCAAGATCCAACCTTATTTGAAGGTACCATTCGAGGCAATCTTGATCCTCTGGATGAGCACTCAGATAAAGAGATTTGGGAGGCACTTGATAAGTCTCAGCTTGGAGAGGTTATCCGTGAGAAAGGACAACAGCTTGACACACCAGTTCTAGAAAATGGAGATAATTGGAGTGTAGGACAGCGACAACTTGTTGCTCTGGGCCGAGCTCTGCTGCAGCAGTCAAGAATACTTGTACTGGATGAAGCAACAGCATCAGTTGATACTGCCACGGATAATCTTATCCAGAAGATTATCCGAAGTGAGTTCAAAGACTGCACTGTTTGCACCATTGCACATCGAATACCTACTGTCATTGACAGTGATCTAGTTCTTGTGCTCAGTGATGGTCTAGTCGCAGAGTTCGACACTCCTTCAAGACTATTAGAGGATAAGTCATCCGTGTTTCTGAAGTTGGTGACCGAGTATTCATCACGTTCAAGTGGCATACCAGACTTTTAG 4620 0.4338 MAVDEIEILSPTFSSSGSFETLWSAILGLPLLELVAICANLTLSLLFLFVVSARKVLVCVGRGVRFGKENITGNASPGCVSVDLETRDVVRIETWFKLSVLSCLYVLLVQVLLLGFDGVALIRGRDLDVDLDLGLALLSVPLVQGLAWVVLSFSALQCKFKASERFPILLRLWWVMLFGICLCGLYVDGKGVWMEGSKHLRSHVVANFTITPALAFLCIVAIRGVTGIKVFRNSEEHQPLLVEEEPGCLKVTPYTDAGLFSLATLSWLNPLLSIGAKRPLELKDIPLVAAKDRSKTNYKVLNSNWERLKAENQSEQPSLAWALLKSFWKEAACNAVFAGVTTLVSYVGPYMISYFVDYLVGKEIFPHEGYVLAGVFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRISSLAKQSHTSGEVVNYMAIDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNVGIAAIATLIATIISIVVTVPIARVQENYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRVKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSGFLLEEELQEDATIVLPQGITNIAIEIKDGIFCWDPSSSFRPTLSGISMKVERRMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSSAYVSQSAWIQSGTIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYILTALADKTVIFVTHQVEFLPAADLILVLKEGCIIQSGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPTHSSEESDENLSLEASVMTSKKSICSANDIDSLAKEVQEGSSISDQKAIKEKKKKAKRSRKKQLVQEEERIRGRVSMKVYLSYMAAAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDLPKVTPSVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLSAIEWLCLRMELLSTFVFAFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDSRPPFSWPENGTIEIIDLKVRYKENLPMVLHGVTCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPASGSILIDNINISEIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLDEHSDKEIWEALDKSQLGEVIREKGQQLDTPVLENGDNWSVGQRQLVALGRALLQQSRILVLDEATASVDTATDNLIQKIIRSEFKDCTVCTIAHRIPTVIDSDLVLVLSDGLVAEFDTPSRLLEDKSSVFLKLVTEYSSRSSGIPDF* 1540
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1412 1539 CDD ABCC_MRP_domain1 646 846 - -
Gso3g1412 1539 CDD ABC_6TM_ABCC_D1 333 620 IPR044746 GO:0140359
Gso3g1412 1539 Pfam ABC transporter 1310 1458 IPR003439 GO:0005524
Gso3g1412 1539 Pfam ABC transporter 665 799 IPR003439 GO:0005524
Gso3g1412 1539 Gene3D - 1276 1529 IPR027417 -
Gso3g1412 1539 Gene3D ABC transporter type 1, transmembrane domain 935 1274 IPR036640 GO:0005524|GO:0016021
Gso3g1412 1539 Gene3D ABC transporter type 1, transmembrane domain 303 627 IPR036640 GO:0005524|GO:0016021
Gso3g1412 1539 ProSitePatterns ABC transporters family signature. 772 786 IPR017871 GO:0005524
Gso3g1412 1539 SMART AAA_5 674 855 IPR003593 -
Gso3g1412 1539 SMART AAA_5 1319 1504 IPR003593 -
Gso3g1412 1539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 869 IPR027417 -
Gso3g1412 1539 SUPERFAMILY ABC transporter transmembrane region 321 626 IPR036640 GO:0005524|GO:0016021
Gso3g1412 1539 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1293 1527 IPR003439 GO:0005524
Gso3g1412 1539 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 976 1246 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g1412 1539 CDD ABC_6TM_ABCC_D2 974 1268 IPR044726 GO:0140359
Gso3g1412 1539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1283 1523 IPR027417 -
Gso3g1412 1539 Coils Coil 493 513 - -
Gso3g1412 1539 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 646 870 IPR003439 GO:0005524
Gso3g1412 1539 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 83 1539 - -
Gso3g1412 1539 CDD ABCC_MRP_domain2 1291 1511 - -
Gso3g1412 1539 Gene3D - 628 892 IPR027417 -
Gso3g1412 1539 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 335 612 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g1412 1539 SUPERFAMILY ABC transporter transmembrane region 973 1273 IPR036640 GO:0005524|GO:0016021
Gso3g1412 1539 Pfam ABC transporter transmembrane region 976 1218 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g1412 1539 Pfam ABC transporter transmembrane region 336 600 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g1412 1539 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 83 1539 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso3g1412 Gso-Chr3 40058442 40066812 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1412 646 863 Calmodulin-binding Proteins AT2G36910 30.769 3.46e-19 92.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1412 - - gmx:100790550 2920.57
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1406 19 42874581 42883287 Gso3g1412 3 40058442 40066812 GST
Gso3g1412 3 40058442 40066812 Gso13g0968 13 24045506 24054534 PCT
Gso13g0968 13 24045506 24054534 Gso3g1412 3 40058442 40066812 PCT