Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1410 ATGGAATCCAAATCCAAAATTCAACTCTTTTTCCTCACCCTTTTCCTCTTCACTCTCACCCTCCATGCAGAAACTCTTGGAACTTACATAGTTCAGCTACACCCTCATGGCATAACCAGCACTTCCTTCTCCTCAAAGCTCAAATGGCACCTTTCATTCATCCAACAAACCATTTCCTCTGATGAGGACCCTTCTTCGCGCCTTCTCTACTCGTACCGTTCTGCCATGGACGGTTTTGCAGCTCAGTTAACTGAGACTGAGCTTGAGTACCTCAAAAACTTGCCAGATGTTATCTCAATCAGGCCAGACAGCAAGCTCCAGATTCAGACCACTTACTCTTACAAGTTCTTGGGGCTGAATCCTGCTAGAGAAAATGGTTGGTACCAATCCGGTTTCGGCCGCGGAACCATAATTGGTGTGCTTGACACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCAAGGAATGCCCCCAATTCCCCAAAAATGGAAGGGTATATGCCAAGCTGGGAAGGCCTTTAACTCTACCAATTGTAACCGAAAACTCATCGGTGCAAGGTACTTCACAAAAGGCCATTTTTCAGTGTCACCTTTCAGAGATCCTGAGTATCTCTCTCCGAGAGACTCCTCAGGACACGGCACGCACACCGCATCCACCGCGGGAGGCGTGCCTGTTCCGCTGGCGAGCGTGTTCGGTTATGCGTCCGGCGTGGCGAGAGGAATGGCTCCTGGTGCCCACATTGCGGTGTACAAAGTGTGTTGGTTCAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGGGATGGTGTGGACATTCTGTCCTTGTCTCTTGGTGGCTACTCTTTGCCTCTATATGATGATAGCATTGCCATTGGAAGCTATAGAGCAATGGAGCATGGGATTTCAGTTATATGTGCAGCAGGAAACAATGGCCCTACGGAAATGTCTGTTGCCAATGAAGCTCCTTGGATTTCCACAATTGGTGCAAGCACACTAGACAGGAAATTCCCAGCAACAGTTCACATAGGAAATGGACAAATGCTCTATGGAGAATCCATGTATCCACTGAATCATCATCCAATGAGCAACGGCAAAGAAATTGAGCTGGTTTATTTGTCTGAAGGGGACACCGAGAGCCAATTTTGCCTCAGAGGGTCTCTTCCAAAGGACAAAGTTAGAGGCAAAATGGTGGTCTGCGATCGAGGCATCAACGGAAGAGCAGAAAAGGGACAAGTGGTGAAGGAGGCGGGTGGTGTCGCTATGATCCTCACAAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGGTAGGATTTGATGAAGCAGTCACCCTGAAGGCTTACATAAACTCCACAAAAAGGCCTCTTGCAAGGATCGAATTCGGAGGAACTGTGATAGGGAAGTCTAGAGCTCCATCAGTGGCAAGATTTTCTGCTAGAGGACCAAGCTATACAAACCCTTCAATCCTAAAACCTGATGTTATAGCTCCAGGAGTGAACATCATTGCAGCATGGCCTCAGAACCTCGGTCCTACCGGCCTTCCGGAGGATACTAGAAGAGTTAACTTCTCTGTGATGTCCGGTACCTCAATGGCATGCCCTCATGTCAGTGGAATTGCTGCTCTCATTCGCTCGGTTCACCCGAGATGGAGCCCTGCAGCCATCAAATCTGCAATCATGACAACGGCCGAGGTGACTGACCACACCGGAAGGCCAATACTCGATGAAGACCAACCAGCGGGAGTTTTCGACATGGGAGCCGGACATGTGAATCCACAAAGAGCATTGAACCCTGGATTGGTGTATGACATTAGGCCAGATGACTACATCACCCATCTTTGCAGCCTTGGATACACAAAGTCAGAAATATTCAGCATCACACATAGAAATGTGAGTTGCAATGCAATCATGAAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTAATTTTTAAGGGTGGGGTGAGGAGAAAGATGTTCAGCAGGAGACTAACAAATGTGGGAAGTGCTAACTCCATCTACTCAATGGAGGTTAAGGCACCTGAAGGAGTAAAAGTGATAGTGAAACCAAAGAGGTTGGTATTTAAGCAAGTGAATCAAAGCTTGAGTTATAGGGTGTGGTTTATATCAAGAAAAAGGGTTAAAAGAGGTGATGATTTGGTGAACTATGCAGAAGGGAGTTTGACATGGGTGCACTCACAAAATGGTTCCTACAGGGTTAGAAGCCCGGTAGCAGTGACTTGGAAGTCAAAGTAG 2307 0.4725 MESKSKIQLFFLTLFLFTLTLHAETLGTYIVQLHPHGITSTSFSSKLKWHLSFIQQTISSDEDPSSRLLYSYRSAMDGFAAQLTETELEYLKNLPDVISIRPDSKLQIQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPIPQKWKGICQAGKAFNSTNCNRKLIGARYFTKGHFSVSPFRDPEYLSPRDSSGHGTHTASTAGGVPVPLASVFGYASGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGYSLPLYDDSIAIGSYRAMEHGISVICAAGNNGPTEMSVANEAPWISTIGASTLDRKFPATVHIGNGQMLYGESMYPLNHHPMSNGKEIELVYLSEGDTESQFCLRGSLPKDKVRGKMVVCDRGINGRAEKGQVVKEAGGVAMILTNTEINLGEDSVDVHVLPATLVGFDEAVTLKAYINSTKRPLARIEFGGTVIGKSRAPSVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDTRRVNFSVMSGTSMACPHVSGIAALIRSVHPRWSPAAIKSAIMTTAEVTDHTGRPILDEDQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYITHLCSLGYTKSEIFSITHRNVSCNAIMKMNRGFSLNYPSFSVIFKGGVRRKMFSRRLTNVGSANSIYSMEVKAPEGVKVIVKPKRLVFKQVNQSLSYRVWFISRKRVKRGDDLVNYAEGSLTWVHSQNGSYRVRSPVAVTWKSK* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1410 768 CDD PA_subtilisin_like 345 473 - -
Gso3g1410 768 Pfam Fibronectin type-III domain 659 763 IPR041469 -
Gso3g1410 768 Pfam Peptidase inhibitor I9 28 108 IPR010259 -
Gso3g1410 768 Gene3D - 339 480 - -
Gso3g1410 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Gso3g1410 768 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 23 765 - -
Gso3g1410 768 Gene3D Peptidase S8/S53 domain 135 623 IPR036852 GO:0004252|GO:0006508
Gso3g1410 768 Pfam PA domain 384 457 IPR003137 -
Gso3g1410 768 SUPERFAMILY PA domain 350 437 IPR046450 -
Gso3g1410 768 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Gso3g1410 768 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Gso3g1410 768 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Gso3g1410 768 ProSiteProfiles Serine proteases, subtilase domain profile. 111 610 - -
Gso3g1410 768 CDD Peptidases_S8_3 106 577 IPR034197 -
Gso3g1410 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 765 IPR045051 -
Gso3g1410 768 SUPERFAMILY Protease propeptides/inhibitors 50 108 - -
Gso3g1410 768 Gene3D - 627 765 - -
Gso3g1410 768 Pfam Subtilase family 133 589 IPR000209 GO:0006508|GO:0008236
Gso3g1410 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Gso3g1410 768 SUPERFAMILY Subtilisin-like 109 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1410 Gso-Chr3 40046210 40048979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1410 9 767 Subtilisin-like Serine Gene Family AT1G04110 66.667 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1410 - - gmx:100790205 1524.61