Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1397 ATGGAACCCTTAACAGAGCTTGCATTATCAATGAAGGTGACAGAAAAATGTGACGTTTACGGTTTTGGGATTGTTGCACTAGAAATTCTGGTGGGGAGGTACCCTCAGGAGGTCCTTCCGTGTTTAGAGTCTGAGGAATTTGGTCAACACTTCTTAGATTTCCTAGATAAAAGGTTGGCTCCGCCTAAAGGTATTGCAGCTGAAGTCCTAATGTTGGTATTAAGACTTATTCTAAAATGTATTCACAAAAATCCTTTGTGTCGACCCACCATGAATCATGTGTCCCAAGAGTTGCTCACACTCACTGTGCCTAGCTTTCAACATGTCGACACTGCACAATCTAGTGCACAACTAGACTCTGAGATTGAGATAGCAACTTTTATTTAA 387 0.4134 MEPLTELALSMKVTEKCDVYGFGIVALEILVGRYPQEVLPCLESEEFGQHFLDFLDKRLAPPKGIAAEVLMLVLRLILKCIHKNPLCRPTMNHVSQELLTLTVPSFQHVDTAQSSAQLDSEIEIATFI* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1397 128 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 6 116 - -
Gso3g1397 128 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1397 128 SUPERFAMILY Protein kinase-like (PK-like) 6 105 IPR011009 -
Gso3g1397 128 Pfam Protein tyrosine and serine/threonine kinase 6 98 IPR001245 GO:0004672|GO:0006468
Gso3g1397 128 Gene3D Transferase(Phosphotransferase) domain 1 4 109 - -
Gso3g1397 128 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1397 Gso-Chr3 39925924 39929951 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1397 6 98 Receptor kinase-like Gene Family AT1G62950 37.255 2.30e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso3g1397 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1397 - - gsj:114406949 256.144