Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1361 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGATGCATATTATAGCAATCCTGATGATTACGACTCTTCAGAAAATAAGCACTGCCAGAAGACCTTGGAACAGATTGGTTGTGGGAAATTTTCACACAGTGCATTAGAGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATCGTTGGACAGGTAGCTGTTACTGGAAAGCATAGGTGGATCTGTGCAGATAATCAAGTTGCAGGTTCTGGCTTGTCTTTTGAGACTATTGCTGTTGTTGCTGTAGTCCCACTTGGTGTTGTTCAGCTTGGCTCTCTAAATAAAGTGATTGAAGATATGGAGTTTGTAACTCATATCAGAAATCTTTTTTTGTCTACTCAAAATTACTCAATCCTACGTCCTAGTCAAATACAGGGTAGTTTGAAGAGCTCATCTGAGCTGGATACATTGAAGGAAAATTTGTCTTCAGATATTATGCCTACTTGCTTTTACGATACACAGAAATCTATGAAAAGTGAAACAGCAGATGTTTTAATGCCCCTTCAATGTTCTGGGACTGGGAGGAACTATACACCTTCTGCTCATGAGAAAATGTCTGATAATGTGGCCAAGCAAGAGGGACCTGAATTGTACAATGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGACTGTAAGGAATTTGAAGAGATGAAACCTCTATATGGGATGAAGTATGAAGGTGGAAGTAGTGGCGACTGCAAAGATATGAGATTGGAATCAGAAAAAAATGTCTCATCATATTTAAATGATTTTGTTACAGATAATGCTAGCTTCAATGATTTAATATGTCCATCAGAAAAAGTCAGAGTTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATACAGTTGTTTGTGAAAGTGATAAATTGCATTATGCGGATATTAACCAAAAAGGGGCATTGAATTTTGCCCAACCTTCAGAAGCAAACTCCCAGCAACATATTGAAAAGTCAAAGTTTCATACTGAGCCTTGTTACAAGGATATCTCGGACTTTCAAACTGAACCTTGTTATAAGGATGCCTCACAGATGTTGAATTTTCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCAGCTTTTTCGAAAGTGGGTAAATGTTTTGATTGGCCAACACAGGTTAATCAAGAAATGAAACCTGTTGAAATGTCAGATGAGATTAGCACTAGCCAATTGACTTCTGAATCTTGTCCAGAACATCTTTTGGAAGCAATGCTGGTCAACATTAACCATAGTAATAATGATGTTAATAGTGAATTATCATTTTGTACATCAAAGCAATCTGCAATGGCCTCTGCAAAAAATCATGAAGCTTCTATTCACAATGTGCATACTATTAATTCAGAAGGCTATTTGATGGATCAGCTCTCTCTTGTCAGAGAGGACAAACACCATTCTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCCTCAAAAGGTGTTTCATCTACATTTCATAGTTCAAATAGTGGACAGCTTGAAAGGTCGTCTGAACCATCCAAGAACAGCAAAAAAAGGGCCAGGCCAGGGGAAAGTTGTAGGCCTCGGCCACGGGATAGACAACTGATCCAAGATCGTATCAAGGAGTTGAGGGAGCTGGTGCCAAATGGAGCCAAGTGCAGTATTGATTCACTCCTGGAGCGTGCAATAAAGCACTTGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGCTGATACAAAGTCAAAGTTGCATCACAAGGAAGCAGACATTCTTGGATCCTCTAGTTATGATCAGGGCTCAAGCTGGGCCATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTGGTAAGAATGGACAAATGCTTGTTGAGATGCTCTGTGAGGAATGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGCCTTACCATTTTAAAGGGTGCAACAAAAGCTCATGGTGAAAAGATATGGATATGCTTTGTCGTCGAGGGTCAAAACAACAAAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2229 0.3984 MGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYSNPDDYDSSENKHCQKTLEQIGCGKFSHSALELAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFETIAVVAVVPLGVVQLGSLNKVIEDMEFVTHIRNLFLSTQNYSILRPSQIQGSLKSSSELDTLKENLSSDIMPTCFYDTQKSMKSETADVLMPLQCSGTGRNYTPSAHEKMSDNVAKQEGPELYNDESSILLQSISNMMNVDCKEFEEMKPLYGMKYEGGSSGDCKDMRLESEKNVSSYLNDFVTDNASFNDLICPSEKVRVDSACFPSVFLDTVVCESDKLHYADINQKGALNFAQPSEANSQQHIEKSKFHTEPCYKDISDFQTEPCYKDASQMLNFPAGCELHEALGPAFSKVGKCFDWPTQVNQEMKPVEMSDEISTSQLTSESCPEHLLEAMLVNINHSNNDVNSELSFCTSKQSAMASAKNHEASIHNVHTINSEGYLMDQLSLVREDKHHSLSSSSGICGVMSSKGVSSTFHSSNSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHLLFLQSITKHADKLTDFADTKSKLHHKEADILGSSSYDQGSSWAMEVGGHLKVHSILVENLGKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATKAHGEKIWICFVVEGQNNKNVHRLDILWPLVQILQSKSTVYSQ* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1361 742 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 742 IPR043561 GO:0003700|GO:0006355
Gso3g1361 742 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 152 IPR025610 -
Gso3g1361 742 MobiDBLite consensus disorder prediction 547 571 - -
Gso3g1361 742 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 569 611 IPR036638 GO:0046983
Gso3g1361 742 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 742 - -
Gso3g1361 742 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 556 605 IPR011598 GO:0046983
Gso3g1361 742 MobiDBLite consensus disorder prediction 532 546 - -
Gso3g1361 742 MobiDBLite consensus disorder prediction 532 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1361 Gso-Chr3 39533952 39541795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1361 1 737 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.141 6.64e-143 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1361 - - gmx:100776869 1469.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1357 19 42321615 42329658 Gso3g1361 3 39533952 39541795 GST
Gso3g1361 3 39533952 39541795 Gso10g0298 10 3190137 3197557 PCT
Gso10g0298 10 3190137 3197557 Gso3g1361 3 39533952 39541795 PCT