Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1342 ATGGCTCTTGCTAGCTCTGTGGTTGAGCTTCAACCCTCTTCAGTGAAGAAGAAAACTGCAGTTTCCAGAAGTTGGATTCTGCTGGACCACTATGGCAAGGGCACTGTTCTGGATGCCGATAAGTATGCTATCATGCGCCTGGTTCAAATTCACGCAAGAGATCTTCGGATTCTCGACCCTCTCTTATCTTATCCTTCCACCATTTTGGGCAGAGAGAAAGTCATTGTTCTCAATTTAGAGCACATTAAAGCTATCATCACTGCAGATGAGGTGTTACTAAGAGACCCAATGGATGATGACGTTGTGCCAATTGTTGAGGAACTTCGACGACGGTTACCCCAAGTAAGTGCTGCTGAGCAAGGCCAAGGAAAAGAAGAGGCTTGTGCTCAAGATGGTGAAGGTGGAGAAGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGCTTTATTTGAGGCAATTTGTAGTTTTCTTGACGCACGAACGAGAGAATTAGAGACTTCTGCTTATCCAGCTTTGGACGAACTGATCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGCGAAAATTGAAATGTGCAATGACGAGGTTGACAATTCGAGTTCAAAAGATTAGAGACGAACTAGAAAGCCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAATTGGATGCTTCATCCTCTCCAACTAGTAGCTCTGATGCTCCATACTGGCTTTATGGGTCTCCAAATACAGGTTCAAAAAGACACAAATCAAGCAGAGTTAGTGGAACAACAGTTCAAAGGGAGAATGATGTTGAGGAGCTCGAAATGTTACTTGAGGCCTATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAATATATCGATGACACAGAAGATTACATCAACATACAGCTGGACAATCACAGAAATCAATTGATTCAGCTAGAGCTCTTCATCAGTGTCGGGACTGTCTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGGGGGAATGGTTTGTGCATCCTTGTTTTTATCCATTGTATCGTATGCTCGACGCAAAGGCCTTGTTGGGTCTTGA 1167 0.4259 MALASSVVELQPSSVKKKTAVSRSWILLDHYGKGTVLDADKYAIMRLVQIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITADEVLLRDPMDDDVVPIVEELRRRLPQVSAAEQGQGKEEACAQDGEGGEENEFPFEIRALEALFEAICSFLDARTRELETSAYPALDELISKISSRNLDRVRKLKCAMTRLTIRVQKIRDELESLLDDDDDMADLYLSRKLDASSSPTSSSDAPYWLYGSPNTGSKRHKSSRVSGTTVQRENDVEELEMLLEAYFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISVGTVCMSLYSLVAAIFGMNIPYTWKAPGHEHVFKWVVIFGGMVCASLFLSIVSYARRKGLVGS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1342 388 CDD Mrs2_Mfm1p-like 25 385 IPR039204 -
Gso3g1342 388 Pfam CorA-like Mg2+ transporter protein 274 376 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso3g1342 388 Coils Coil 188 215 - -
Gso3g1342 388 Gene3D - 7 96 - -
Gso3g1342 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 388 IPR039204 -
Gso3g1342 388 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 8 388 - -
Gso3g1342 388 Gene3D Magnesium transport protein CorA, transmembrane region 103 317 - -
Gso3g1342 388 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1342 Gso-Chr3 39317622 39321264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1342 1 361 MRS2 Gene Family AT5G64560 71.274 1.84e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1342 K16075 - gmx:100812149 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1344 19 42146648 42150467 Gso3g1342 3 39317622 39321264 GST