Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1320 ATGGGTAACGCAGACTATGCTTACCCTTCGGGTATGAACGTGGAGAGCGTGCACCGAGTGGCCATTCCACCCCCTCAACCCTTCTTCAAGTCCCTAAAGTACTCTATGAAAGAGACTTTTTTCCCAGATGACCCGTTTAGAAAGTTCAAGAACCAGCCAGCTTCTAAGAGGTTCATGCTTGGGCTTCAGTACTTCTTCCCCATCTTCGAGTGGGCTCCCAAGTACACCCTCCACTTCCTGAAATCAGACCTCATATCTGGCATCACCATTGCTAGCTTGGCCATTCCTCAGGGCATCAGTTATGCCAAGCTAGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTTACACCGCCATTGATTTATGCAATGATGGGAAGCTCAAGGGATTTGGCAGTGGGAACAGTGGCGGTTGGATCGCTTCTGATGGCTTCCATGTTGGGTCGAGTGGTTAATTTCAACGAGAATCCAAAGCTTTTTCTCCACTTGGCTTTCACTGCTACGTTCTTTGCTGGAGTTTTGCAGGCATCACTCGGTCTCTTCAGGTTAGGGTTTATCGTGGATTTTGTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTCTGCAACAGTTGAAATCAATCCTTGGCCTAGAGCATTTTACCCACGAGGCCGATCTCGTGTCAGTTATGCGCTCTGTTTTTTCCCAAACGCATGAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTCGTCACAAGATACTTCAGCAAACGACAGCCAAAGTTCTTCTGGGTGTCAGCAATGGCACCACTGACGTCCGTTATATTGGGAAGTCTGCTGGTCTATGTCACACACGCTGAGAAACATGGAGTTCAAGTGATAGGAAATTTGAAGAAGGGGCTGAATCCACCTTCGGCAACGGATTTGGTGTTTGTGTCACCTTACATGGGCACTGCCATAAAAACTGGATTCGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTATCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTCGGATCGTTCACTTCTTGCTATCTCACCACAGGACCATTTTCGCGGTCAGCAGTGAACTACAATGCTGGGTGCAAAACTGCTGCATCAAACATTGTAATGGCAATAGCAGTGATGTTGACATTGTTATTCTTAACACCCTTGTTCCATTTCACTCCCCTGGTGGTGCTATCAGCCATAATTGTATCAGCAATGCTCGGGCTCATAGATTATCAAGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTAGTGTGCTTCACTGCTTATGTTGGCGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTGCTTCGAGTACTTCTATTTATTGCAAGGCCAAGGACATTTCTCTTAGGCAACATTCCAAATTCTGCAGTATACAGAAATGTGGAACAATATCCAAATGCAAATCATATTCCTGGAATCCTAATTCTTGAAATTGATGCACCCATTTACTTTGCCAATGCAAGCTATTTAAGGGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGATAGAATCAAAGCTACAGAGCAAACCAGTTTGCAATATGTTATAATGGACATGACCGCTGTTGCTAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTGCAAGAAGACTGTTGACAGAAGAGGGTTACAACTTGCTTTGGTGAATCCAGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTGGGGCAAAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGTGCGTGCAACTTCATGCTCCATTCCTACAAACCGAACCCCATGAAGGATGAATCAGAAGGTTGGAACAATGCCTAA 1971 0.4465 MGNADYAYPSGMNVESVHRVAIPPPQPFFKSLKYSMKETFFPDDPFRKFKNQPASKRFMLGLQYFFPIFEWAPKYTLHFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFTPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNFNENPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFVSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFSQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLTSVILGSLLVYVTHAEKHGVQVIGNLKKGLNPPSATDLVFVSPYMGTAIKTGFVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFTAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSAVYRNVEQYPNANHIPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKATEQTSLQYVIMDMTAVANIDTSGISMLEECKKTVDRRGLQLALVNPGSEVMKKLNKSKFLDELGQKWIYLTVEEAVGACNFMLHSYKPNPMKDESEGWNNA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1320 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso3g1320 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Gso3g1320 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Gso3g1320 656 PANTHER SULFATE TRANSPORTER 2 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso3g1320 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Gso3g1320 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 654 - -
Gso3g1320 656 Pfam STAS domain 512 630 IPR002645 -
Gso3g1320 656 Gene3D STAS domain 491 636 IPR036513 -
Gso3g1320 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Gso3g1320 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1320 Gso-Chr3 39048795 39057652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1320 10 644 Inorganic Solute Cotransporters AT4G02700 67.296 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1320 K17471 - gmx:100804670 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1319 19 41876772 41885749 Gso3g1320 3 39048795 39057652 GST
Gso3g1320 3 39048795 39057652 Gso2g1201 2 14983636 14991785 PCT
Gso3g1320 3 39048795 39057652 Gso10g0252 10 2593223 2603583 PCT
Gso2g1201 2 14983636 14991785 Gso3g1320 3 39048795 39057652 PCT
Gso10g0252 10 2593223 2603583 Gso3g1320 3 39048795 39057652 PCT