Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1296 ATGGCGGCAATTGTTGTTGGTGCAACAGAAACATCAATTAGCACATCTAGACAGCTAGGAATCCCCCATCAATGTGCCAGCATCATTTGGATCTGCGGCCCAGTCCTCGACCTCTTCATGCAGCCCCTTATCGGCCACATTAATGACCGTTGCACTAGCCGCTTCGACCGTCGTAGGCCCTTCATCCTCATCGATGTCGTCATCATCTTTGTCGTTGTCCTTATCATTGCTTACACCGCCAACATCAGTTGGCTCCTCAGTGACACCACGGACTACCACCCTGTTACCATCACTATCTTCATTATCGACTTTTAG 315 0.4952 MAAIVVGATETSISTSRQLGIPHQCASIIWICGPVLDLFMQPLIGHINDRCTSRFDRRRPFILIDVVIIFVVVLIIAYTANISWLLSDTTDYHPVTITIFIIDF* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1296 104 Coils Coil 102 104 - -
Gso3g1296 104 PANTHER SUGAR TRANSPORTER 1 104 - -
Gso3g1296 104 Gene3D MFS general substrate transporter like domains 2 100 IPR036259 -
Gso3g1296 104 SUPERFAMILY MFS general substrate transporter 18 85 IPR036259 -
Gso3g1296 104 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 1 104 - -
Gso3g1296 104 Pfam MFS/sugar transport protein 18 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1296 Gso-Chr3 38743446 38744437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1296 17 104 Sucrose Transporter Gene Family AT1G09960 47.191 1.34e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1296 K15378 - gmx:113001245 202.986