Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1233 ATGTTTTCTTTTAATTACCTATTCACCACCATTTTCTTAGTGCTAACATTCTTTCTTTATCCATCAAATGCTCAACTGAGTTCAACCTTCTACTCCAGCACATGCCCCAACGTGTCTTCCATTGTGCGCAGTGTTGTTCAGCAGGCTCTGCAATCTGATCCTCGAATTGCTGCGAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGGATCCATTTTGTTAGACGTAGGTGGCAACATAACACTGAGCGAGAAAACTGCAGGTCCCAACAATAATTCGGCTCGTGGCTTTGATGTGGTCGACAACATAAAGACATCTATTGAAAATTCATGCCCTGGTGTTGTATCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGTTTCGGTGTCTTTGGGAGGAGGTCCTTCATGGAACGTACTACTAGGAAGAAGGGACGGTTTGATTGCAAACCAATCTGGTGCGAACACATCCATTCCCAATCCAACAGAAAGCCTGGCCAATGTCACTGCCAAATTTGCTGCCGTTGGCCTAAACATAACTGATCTCGTTGCATTATCTGGTGCACATAGTTTTGGTCGTGCGCAGTGTAGATTTTTCAACCAGAGACTGTTCAACTTCAGCGGCACAGGTAGCCCTGATCCCACGCTGAATGCAACCTATTTAGCGACACTTCAGCAAAACTGTCCACAAAACGGAAGCGGCAACACTCTGAACAACCTCGACCCTTCGTCTCCGGACACCTTCGACAACAACTACTTCCAAAACCTTCTCAGCAATCAGGGCCTTCTCCAAACAGACCAAGAGCTCTTTTCCACCAACGGCGCCGCCACAGTTTCCGTCGTCAACAACTTCGCCGCCAACCAAACCGCGTTCTTCCAAGCCTTTGCTCAGTCCATGATTAACATGGGTAATATTAGCCCGTTGACTGGAAGCCAGGGTGAAATCAGATCAGATTGTAAAAGGGTCAATGGAAGTTAA 993 0.4622 MFSFNYLFTTIFLVLTFFLYPSNAQLSSTFYSSTCPNVSSIVRSVVQQALQSDPRIAASLTRLHFHDCFVNGCDGSILLDVGGNITLSEKTAGPNNNSARGFDVVDNIKTSIENSCPGVVSCADILALAAEVSVSLGGGPSWNVLLGRRDGLIANQSGANTSIPNPTESLANVTAKFAAVGLNITDLVALSGAHSFGRAQCRFFNQRLFNFSGTGSPDPTLNATYLATLQQNCPQNGSGNTLNNLDPSSPDTFDNNYFQNLLSNQGLLQTDQELFSTNGAATVSVVNNFAANQTAFFQAFAQSMINMGNISPLTGSQGEIRSDCKRVNGS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1233 330 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601|GO:0042744
Gso3g1233 330 Gene3D Peroxidase, domain 2 164 307 - -
Gso3g1233 330 Gene3D - 30 328 - -
Gso3g1233 330 PANTHER PEROXIDASE 72-RELATED 5 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gso3g1233 330 PANTHER PEROXIDASE 5 329 - -
Gso3g1233 330 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1233 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1233 Gso-Chr3 37982337 37984876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1233 6 330 Peroxidase AT5G06720 72.615 2.57e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1233 K00430 - gmx:100783115 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1233 3 37982337 37984876 Gso3g1233 3 37982337 37984876 ECH
Gso19g1236 19 40840467 40842797 Gso3g1233 3 37982337 37984876 GST