Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1232 ATGAGGATCCGGAAAAGGCCGGCGCTTTTCCCTTCTTCGCTCTCGCCGCTGCGTCTCTCAGATCCCCACCTGATCAACCGGTCACCGGTGGTGGTGCAACTAAGCGACGCTACTTCCACCGCACCGAAACTCTCTTTTTCTTCTTCTGCACACCATGCTGCTTTCGCGCATCCTTCGACCTTGGATCGTTTCCAGCCGTCTGATCAGCCTCTCCCTTTGATCGGGAAACAAAGCAACGGCTCGGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGACGAGGTTGTTAGAAGAGAAGAGAGTGGAGAAGACTCGGGAGAGAAGGGTAACCATATCAGGAAAGGACGCACCTTTGGTTCGGAAAAAACACAAGCTGAGTTGTTGCCACCGTTAAGCTCATCTTCTACTCAAGATGGGAGATGGTACGAGGGAGAGAAAGCGATTCCGCTGAAGAAAAGGAGAGGGAACTTCGAGGAGAATAATAATAATAATAATGCTGCTGCTCATAGCAAGAAGATGATGAAGGCGAAGATGAAGACGAAGATGAACAAGAAGTGTTCAACGCCGCGCAACAACGAGGATAGCACGGGAGAGGAAGAAGTGAAGAAGAAGGTAGAAGAAACAATAAAAGTGGAAGTGAATGTTGTGAGTAAAAAGAGAGCAAGGGGTAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGGTGCTGCCAGCAAACGCTGGTTGGTTACTCGCTGTGTGAGCATCACTTGGGGAAGGGAAGACTCAGAAGCATGACAAGTGTTAGAAGCCGTTCCATTATTGCATCAACTGCACCAAAGGAGGTGCACGTGCACCACGTGCCTCACCCTTCTTCTTCTTCCCCTTCTTTTTGTTCTCTCGAGAAGCAAATTGAGTGTGTTGATGATGCTGAGCCCTTTGGGGAGAAGGAGGAGAAGAAACCAGGGATAATAATGACGTCGACGAAGAAGAGGATGAAGCTTGGCATGGTGAAAGCGCGTTCCATAAGCAGTTTGCTGGGGCAAACAAGCAACCACATTGCTGCTGTAGCTCATGAGAATAGCAAGTAA 1119 0.4969 MRIRKRPALFPSSLSPLRLSDPHLINRSPVVVQLSDATSTAPKLSFSSSAHHAAFAHPSTLDRFQPSDQPLPLIGKQSNGSDDPSGIGESGAHRQHNKQDPLDEVVRREESGEDSGEKGNHIRKGRTFGSEKTQAELLPPLSSSSTQDGRWYEGEKAIPLKKRRGNFEENNNNNNAAAHSKKMMKAKMKTKMNKKCSTPRNNEDSTGEEEVKKKVEETIKVEVNVVSKKRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIIASTAPKEVHVHHVPHPSSSSPSFCSLEKQIECVDDAEPFGEKEEKKPGIIMTSTKKRMKLGMVKARSISSLLGQTSNHIAAVAHENSK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1232 372 PANTHER OS02G0773600 PROTEIN 41 370 - -
Gso3g1232 372 MobiDBLite consensus disorder prediction 196 210 - -
Gso3g1232 372 PANTHER - 41 370 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso3g1232 372 Pfam WRC 238 278 IPR014977 -
Gso3g1232 372 ProSiteProfiles WRC domain profile. 236 280 IPR014977 -
Gso3g1232 372 MobiDBLite consensus disorder prediction 62 85 - -
Gso3g1232 372 MobiDBLite consensus disorder prediction 60 149 - -
Gso3g1232 372 MobiDBLite consensus disorder prediction 191 210 - -
Gso3g1232 372 MobiDBLite consensus disorder prediction 93 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1232 Gso-Chr3 37968482 37971161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1232 233 287 GRF Transcription Factor Family AT2G36400 36.842 8.42e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1232 - - gmx:100781689 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1232 3 37968482 37971161 Gso3g1232 3 37968482 37971161 ECH
Gso19g1235 19 40831889 40834459 Gso3g1232 3 37968482 37971161 GST
Gso3g1232 3 37968482 37971161 Gso2g1461 2 28813371 28816298 PCT
Gso2g1461 2 28813371 28816298 Gso3g1232 3 37968482 37971161 PCT