Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1219 ATGATCGTGCCGAAACGCGAATTGATTAACGACGACGACGATAAAGATAACGACGCCGTTAACGACGACGACGCTGATGATCACCAAACGCCGAAAGGCCGGCGAGGTATTCGTTCACGGTACCTCTCCGTCAAGAACATGATTCACGATGAAAGGGAAGAAATTGCCAGGGCTGACTCTCACAAGTTTAATTTGATCTTTAATGAAATGGAAACCTTACATCAGCTAGTTACAAAGCCAAGAGAACAAGTAGCCGATGCAAAGGCTCTTTTGGACATCACCCAATCTTTGGTAATGTCTGTGAAAAATATTGCCATTGGTGGACTAACTCCTTCAGACTTTGTTACCCACATTCTTAAAAAATTCGGAGGACAAGCTGGACCAAGTAATAGCACTGAAGATTTCAGCAGAAACTCAGTAGCTTGGAAGGATATTGGAGTTGCAGTGTCACGTGTTTTTAGAGCGGGTTGTGGGTGTTATACAATGATTGGCGCCATGGATGCTAAAATAAAACAGAGGAAGGTTTATAATCGTCGCAAGCGTGTGAGACCCACTGAATTGGCCCGGCCTAAAGAGCTTGGTGGTGGTTCGGGAGAAGAGAGAACTGAGACTGATAAACATATGATAACCATGTTTAACATCTTAAGGATTAATAAATTTGTGAAGCTTGAAAATCTGATTTTGAATCGGAACTCATTCGCACAAACGGTGGAGAATTTATTTGCTTTATCCTTTTTAGTCAGAGATGGGCGGGCTGAAATAAAAGTGAACGAGGCTGGATGGCTAATAGTTTCGCCAAGGAATGCTCCTGCTGCTAATTCAGTAGTTTCCAGGGATGTTGCTTTTAGCCACTTTGTATTCAGATTTGACTTCAATGATTGGAAGCTGATGGTTTGCTCTGTTGGTGTTGGTGAGGAGCTGATGCCTCATAGGGATAGCCAATTACAGAGTCAGACTGAAGTATCTGCAGAATCTAGTGAAAAAAAGAAAAAGAAAGAAAAGAAGCCCAGAACAACAAAAGTTCAGTGA 1029 0.4237 MIVPKRELINDDDDKDNDAVNDDDADDHQTPKGRRGIRSRYLSVKNMIHDEREEIARADSHKFNLIFNEMETLHQLVTKPREQVADAKALLDITQSLVMSVKNIAIGGLTPSDFVTHILKKFGGQAGPSNSTEDFSRNSVAWKDIGVAVSRVFRAGCGCYTMIGAMDAKIKQRKVYNRRKRVRPTELARPKELGGGSGEERTETDKHMITMFNILRINKFVKLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWLIVSPRNAPAANSVVSRDVAFSHFVFRFDFNDWKLMVCSVGVGEELMPHRDSQLQSQTEVSAESSEKKKKKEKKPRTTKVQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1219 342 MobiDBLite consensus disorder prediction 1 35 - -
Gso3g1219 342 PANTHER UNCHARACTERIZED 1 340 IPR027786 GO:0005634|GO:0006281|GO:0030915
Gso3g1219 342 Pfam Nse4 C-terminal 221 308 IPR014854 -
Gso3g1219 342 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 1 340 - -
Gso3g1219 342 MobiDBLite consensus disorder prediction 310 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1219 Gso-Chr3 37858377 37862456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1219 34 313 Non-SMC Element family AT1G51130 52.500 4.29e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1219 K22825 - gmx:100781485 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1219 3 37858377 37862456 Gso3g1219 3 37858377 37862456 ECH