Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1215 ATGTATCAGTATAGTTCCCAACTATACGGAACTGAATGGGAGTCCTACATGGGGATTAGCAACCTAGACAAGGTTGTTGGATCAGAACAACTGAGTTTTGAGCCCACAAAATCACCCTTCAACATTGTGACAACTCCTCTTCAAATTACTCCACCAGGTTTTTGTGCAAGTGCAATCAAAAGCCTTGTGAGTTTTCAAGCTCAGCAACAACAACAACATGCTCATCACCAGCATCAGATTGAAGTTCCAGCTGCTTGGTGCTTTGAGTTTCCAAAGACGACAACAACAACAGATACGCACATGGTGATGAACAATATTTGCCAAGCCTCTGGAGATAACTTCACCACAAAACAAGATCGACCATCGTCTCAATTCACAAGCTCCTTCTTGTCTAGCAGTGGTGCAGATTGCCGTTCTTCTTCTGAAAAATATTGTAAAATTGCTTCTTATTCCGAAGAAAAACATAGTAGCATTCAGCCTGATAGTATTCAATATTACGACCTCTATTCACAAGAAGATGATAAATTACTGAGGGATGATGCTGCCACGGATGAAGGGCCCCTTGAAATTTCCTTTCAGAGAAATCAGTTGGACTCGTGTACAAAGCGAGAAAAGCAAGCTCCTCATCGAACTTGTGGTGTTGCCTGTGTAGCTTCTAGGAGAGGCAAAAGAAGAATAAAATGGACCAAAGATCTGCATGAGCCATTTATGATGATTGTCAATAGCCTTGGTGGTCCCGAAAAGGCAAAGCCTAAAGCTATACTAGATATGATGAAATCAGATTTGCTGTCCATTTCTCACGTTAAAAGCCATTTGCAGAAATGTAGGTCTACTATACACATGCACAAAGCTTTGCAGGAAAGATCTGAGAAAGGACAGAGAACTAATGGGGTGTCTGAGCTTCAAGTCAAAATCCATATGCAAATTGAGGAATCACGGCAACTACAACTAGAGATCCGGAGAAATATATGCCAACAACTAAAGATGCAACGAAATTTGCACACTCTAATTCAAGAGCAGAGTCAGCAGCTCAAAGTAATGTTAGATTACCAAAAGGAAAGAACCAAACTGGAGAAGACCCCTTACACAGAACTGGAAGCTACTGTCCCCAAATGA 1116 0.4131 MYQYSSQLYGTEWESYMGISNLDKVVGSEQLSFEPTKSPFNIVTTPLQITPPGFCASAIKSLVSFQAQQQQQHAHHQHQIEVPAAWCFEFPKTTTTTDTHMVMNNICQASGDNFTTKQDRPSSQFTSSFLSSSGADCRSSSEKYCKIASYSEEKHSSIQPDSIQYYDLYSQEDDKLLRDDAATDEGPLEISFQRNQLDSCTKREKQAPHRTCGVACVASRRGKRRIKWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQKCRSTIHMHKALQERSEKGQRTNGVSELQVKIHMQIEESRQLQLEIRRNICQQLKMQRNLHTLIQEQSQQLKVMLDYQKERTKLEKTPYTELEATVPK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1215 371 Gene3D - 222 279 - -
Gso3g1215 371 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 17 371 - -
Gso3g1215 371 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 223 277 IPR006447 GO:0003677
Gso3g1215 371 SUPERFAMILY Homeodomain-like 222 278 IPR009057 -
Gso3g1215 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 371 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1215 Gso-Chr3 37795752 37798878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1215 222 359 G2-like Transcription Factor Family AT4G28610 40.000 4.20e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso3g1215 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1215 - - gmx:102668008 731.865