Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1211 ATGCATGTTTTGGAACTCAGAAAAAGAAAGCAAAGAGAAAATATTGTTGATATTTCTGTGTGTTTCCCAATACTCAGGAAAATGATTAGCGACTTCCTCTCAGTGCTTCTTAACCTCTCTGTCTTCTCGTCACTTTTGATTTCTCAGAGCTTAGCGTTCACGCATCCACCTGAAGTGTTAGCTCTTCAGGATCTATACAGAACCTTTAACTACCCACCAATGCTCAAAGGATGGAATGGTACCGATCCTTGTGGGGAGTCTTGGACAGGAGTTGCTTGTTCTGGACCATCAGTCATACAGCTAAGACTTCAAGGATTAAACCTCACTGGGTATCTTGGAAGTCTTTTATATAATCTACCTAACTTGAAGCAACTTGATGTCAGTTCGAATAAGATCCTGGGCGAAATACCATTCGGTCTACCCCCCAATGTCTCACATATGAATTTAAGCCACAATTTATTACATGGACCCATTGGTGATGTATTTACTGGTTTAGATAATCTCAGAGAAATGGACCTTTCATACAATAATTTCTCAGGAGATCTGCCGTTCTCATTTGGTTCCTTAAGAAACCTTGCCAGATTGTTCCTGCAGAATAACAGATTCACTGGATCAGTTACTTACTTGGCTGAACTTCCACTCACAGATTTGAACATTCAAGATAATCTGTTTAGTGGCATTCTTCCACAGCACTTTCAATCCATACTGAATTTATGGATTGGCGAGAATAAATTCTATGAGGCGGACAACTCTCCTCCCTGGAGTTTTCCTCTGGATACTGTATCAGTTGAGCATAACACTAGTAGCCCACCCACAACTCAGGCAAATGCTATAAAGAATTATTCCCCTCCCAGAGTAAGTGAGGCTCCTCCCAGAGTAAGTGAGGATCTTCCCAGAGTAAATGAGGCTCCTCTCAGAGTAAGTGAGCACAAGAAGAAACGTATAGGTCCTGGAGGAATAGCATGTATGATTGGTGGAGGAACACTGATGGCCACCGGAGTGGCGCTCTTTGTTGCAACCCGATTGAATAAATGTCGTGAAGAGAGCCCGAACTCGAAAAGCTCAGAAAGCAACCATGGCTCATTGCATTCTCATCCGATCAGTGAAGCCATAGGGATCACTTCTAACGCACTAGAGGAGAGGCAGAGTCCACAAGTCCCCCCCATTAATTCCGCATCCCTTTTGGGCCCTGTGGGATTGCCTTCCCTGAACCATAACAATACAGAGGAACCATTAAGAAGAAGTTTTTCCAAAAGAAGCAGATTCACTGGAAGGACGAAAGTTTACACAGTAGAGGAGCTTCAGTTGGCTACTAATTGCTTCAATGAAGCCAATGTTCTTGGAGAGGGATCTCTTGGCCCTGTTTATAGAGCTAAATTTCCAGATGGCAAAATTTTGGCCGTGAAGAAGATAAACATGGCGGGCATGTCCTTCAGAGAAGAGGTAAAGTTCTTGGATATTATTGGCACGATTTCCAGACTGAAGCACCCCAACATAGTAGCACTCAATGGTTACTGTTTGGAGCATGGAAAGCATCTTCTTGTTTACGATTACGTTAGAAATTTCACTCTGAACGATGCTCTTCACAATGAGGCATACAAATCTCTGCCGTGGGTCCACCGTCTCCGGATTGCTCTAGGTGTTGCTCAGGCTCTGGACTATTTGCATGCAACGTTCTGCCCTCCCGTGGCACACGGAAACTTGAAGGCTGTCAATGTTCTACTCGATGAAAATTTGATGCCTCGTGTTTGTGACTGTTGCTTGGCTATTTTGAAACCACTGATCAGCAATCAAGTCGAAATTCCGGCTGATGAGATTAATATTGGAGAGATAGTCTGCGTTACACCGGATCATGGCCAAGCAGGAACCAGCAGCAGAAAGAGAGACGTTTTTGCCTTTGGGGTATTGCTTCTGGAACTGTTAACAGGAAGAAAACCTTTCGATGGAGCCAGGCCAAGGGACGAACAATATCTGGTGAAATGGGCTCCACCCTTGCTTCCTTACAGAGCAAGTTTGGAACAGCTGGTAGATCCCCGTATGGAAAGAACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATACAGCCTGTAAAGCAACTACGTCCTCCAATGTCCGAAGTTGTGGAGTCTCTTGAAGCTTTATACCAAAAGTTCAACATTGAAAAGAGCGATGTAGCAGATGGCACTGAAGTGGATCCATTTGAGAGGTCTTTCCATTCGACCAACATATGCTTTATGGGTTCTCCACCGGCAGTGAGCCATGCATCAGCCTGA 2292 0.4424 MHVLELRKRKQRENIVDISVCFPILRKMISDFLSVLLNLSVFSSLLISQSLAFTHPPEVLALQDLYRTFNYPPMLKGWNGTDPCGESWTGVACSGPSVIQLRLQGLNLTGYLGSLLYNLPNLKQLDVSSNKILGEIPFGLPPNVSHMNLSHNLLHGPIGDVFTGLDNLREMDLSYNNFSGDLPFSFGSLRNLARLFLQNNRFTGSVTYLAELPLTDLNIQDNLFSGILPQHFQSILNLWIGENKFYEADNSPPWSFPLDTVSVEHNTSSPPTTQANAIKNYSPPRVSEAPPRVSEDLPRVNEAPLRVSEHKKKRIGPGGIACMIGGGTLMATGVALFVATRLNKCREESPNSKSSESNHGSLHSHPISEAIGITSNALEERQSPQVPPINSASLLGPVGLPSLNHNNTEEPLRRSFSKRSRFTGRTKVYTVEELQLATNCFNEANVLGEGSLGPVYRAKFPDGKILAVKKINMAGMSFREEVKFLDIIGTISRLKHPNIVALNGYCLEHGKHLLVYDYVRNFTLNDALHNEAYKSLPWVHRLRIALGVAQALDYLHATFCPPVAHGNLKAVNVLLDENLMPRVCDCCLAILKPLISNQVEIPADEINIGEIVCVTPDHGQAGTSSRKRDVFAFGVLLLELLTGRKPFDGARPRDEQYLVKWAPPLLPYRASLEQLVDPRMERTFSSKALSRYADIISLCIQPVKQLRPPMSEVVESLEALYQKFNIEKSDVADGTEVDPFERSFHSTNICFMGSPPAVSHASA* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1211 763 SUPERFAMILY Protein kinase-like (PK-like) 419 718 IPR011009 -
Gso3g1211 763 PANTHER OS01G0253100 PROTEIN 29 763 IPR045271 GO:0004714|GO:0006468
Gso3g1211 763 MobiDBLite consensus disorder prediction 264 281 - -
Gso3g1211 763 Pfam Leucine rich repeat 142 202 IPR001611 GO:0005515
Gso3g1211 763 Pfam Protein tyrosine and serine/threonine kinase 445 717 IPR001245 GO:0004672|GO:0006468
Gso3g1211 763 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 29 763 - -
Gso3g1211 763 Gene3D Ribonuclease Inhibitor 54 283 IPR032675 -
Gso3g1211 763 MobiDBLite consensus disorder prediction 264 312 - -
Gso3g1211 763 Gene3D Transferase(Phosphotransferase) domain 1 520 740 - -
Gso3g1211 763 SUPERFAMILY L domain-like 55 240 - -
Gso3g1211 763 ProSiteProfiles Protein kinase domain profile. 441 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1211 763 Pfam Leucine rich repeat N-terminal domain 56 94 IPR013210 -
Gso3g1211 763 Gene3D Phosphorylase Kinase; domain 1 403 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1211 Gso-Chr3 37753355 37760179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1211 32 755 Strubbelig Receptor Gene Family AT5G06820 48.413 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso3g1211 PK_Tyr_Ser-Thr 8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1211 - - gmx:100775254 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1211 3 37753355 37760179 Gso3g1211 3 37753355 37760179 ECH