Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1209 ATGGCAGGAACTGCTTTCTCCACCTCCTGTCTTTCCTCTTCTAGCAACTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACTACCTGGAAATGGAAGGAGAAGAATGGCATTAATAAAAGCAGAAGTGAAGTATGTGAACGCTGAAAAAGCTAAGGAACTTGTGGAAGCTGATGGATATACGGTTCTTGATGTGCGGGACAAAAATCAGTTTGAGCGAGCTCACATCAAATCTTGTTCTCATGTGCCTCTTTTTGTTGAAAACAAAGACAATGATCCCGGTACTATTATAAAAAGGCAGCTGCACAATAATTTTTCTGGGTTGTTCTATGGGTTACCATTCACTAAGCCAAATCCTGAATTTGTACAATCTGTTAAGAGCCAGTTTCCCCCTGAAAGTAAACTCTTGGTTGTATGTCAGGAAGGACTGAGGTCTGCTGCAGCAGCAAGTAAGTTAGAAGCAGCTGGTTTCGAAAATATAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGAACTTTTGATTCTGTTGGGTCCACCGAGTTGGAGAATGCTGGCAAAGCTGGCTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTATTCTTGTTTGTGCATATTTATTCATTACCTTCTTTCCCGACCAAGCAGAGAAGCTATTCCAATTGGTCCCTACAGGCTAA 720 0.4222 MAGTAFSTSCLSSSSNLGTCWLVLKTHNARAVPGKLLPGNGRRRMALIKAEVKYVNAEKAKELVEADGYTVLDVRDKNQFERAHIKSCSHVPLFVENKDNDPGTIIKRQLHNNFSGLFYGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASKLEAAGFENIACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKLFQLVPTG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1209 239 Pfam Rhodanese-like domain 57 177 IPR001763 -
Gso3g1209 239 Coils Coil 47 67 - -
Gso3g1209 239 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 42 177 IPR036873 -
Gso3g1209 239 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 238 IPR044615 -
Gso3g1209 239 Gene3D - 42 184 IPR036873 -
Gso3g1209 239 CDD RHOD 60 180 - -
Gso3g1209 239 ProSiteProfiles Rhodanese domain profile. 65 188 IPR001763 -
Gso3g1209 239 SMART rhod_4 55 185 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1209 Gso-Chr3 37743582 37747026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1209 7 233 Sulfurtransferasese or Rhodanese AT2G42220 68.722 2.53e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1209 - - gmx:100500055 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1209 3 37743582 37747026 Gso3g1209 3 37743582 37747026 ECH
Gso19g1211 19 40598407 40602483 Gso3g1209 3 37743582 37747026 GST