Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1202 ATGCTATCACATAATCAACAAACAAAAAAAACACAAACACTTGATAGTACTACTCAAGGTATGGCTTTTCAAGTGTTGTTCATTTGTTTGATCTCAACCATCGTGTTTGCATCCATACTATGGAGAAAACAAAACAAAAATAAGACCCTTCTTCCACCGAGTCCAATGCCCCTACCCATCATTGGACACCTCCACCTTCTTTCTCCAACACCTCACCAAGATTTTCACAAGCTCTCACTCCGCTATGGACCCATAATACACCTTTTTCTTGGTTCAGTCCCCTGTGTGGTGGCTTCCACAGCAGAAGCCGCCAAAGAGTTCCTCAAAACTCACGAACCCGCCTTCTCCAACCGCCCCGCTAACACTGTCGCCGTCGAAACCTTAACCTACGGTTTCCAAGACTTCTTGTTCGCACCCTACGGACCCTATTGGAAGTTCATGAAGAAACTCTGCATGTCCGAACTCCTCGGTGGCCACATGCTGGACCAGTTTCTTCCCGTGAGACAGCAAGAGACAAACAAATTCATCAAACGTGTCCTCCAAAAGGGTATTTCTGGTGAGGCCGTGGATTTTGGGGGAGAGTTCATCACGCTCTCGAACAACATCGTGTCGAGAATGATCGTGAGTCAGACGAGTACTACTGAGGACGAGAACGAAGTTGAAGAGATGAGGAAGCTGGTGAAGGATGCCGCAGAGCTCTCGGGGAAGTTCAACATATCGGACTTCGTTTCGTTCTTGAAGCGCTTTGATTTGCAGGGGTTCAACAAGAGGCTCGAGAAGATTCGGGACTGCTTTGACACCGTGTTGGACAGAATCATAAAGCAACGTGAAGAGGAAAGAAGGAACAATAATGAAACCGTTGGAAAACGGGAATTTAAGGATATGCTTGATGTTTTGTTTGACATATCTGAAGATGAGAGTTCTGAAATTAAATTAAACAAAGAAAACATTAAGGCCTTCATCTTGGACATATTAATTGCTGGGACTGACACCTCAGCTGTAACGATGGAATGGGCTATGGCAGAGTTAATCAACAATCCAGGTGTGTTGGAGAAGGCAAGACAAGAAATGGATGCAGTGGTTGGAAAGAGTAGAATAGTAGAAGAATCAGATATTGCCAACCTTCCTTACTTGCAAGGCATTGTTAGAGAAACATTAAGACTTCACCCAGCTGGTCCATTGCTTTTTAGAGAGTCATCTAGAAGAGCTGTGGTTTGTGGGTATGATATTCCAGCAAAGACTCGATTATTTGTCAATGTTTGGGCTATTGGTAGGGACCCCAATCACTGGGAGAACCCTCTTGAGTTTAGGCCAGAGAGGTTTGTTGAAAATGGGAAGAGTCAATTGGATGTTAGGGGACAACATTATCATCTACTTCCGTTCGGTAGTGGAAGAAGAGCATGTCCTGGTACTTCTTTGGCATTGCAAGTTGTGCATGTGAATTTGGCAGTTCTAATTCAGTGTTTCCAATGGAAGGTTGACAGTGACAATGGCAAGGTGAACATGGAAGAAAAGGCTGGCATCACTCTTCCGAGGGCTCACCCCATAATTTGTGTCCCTATTCCAAGACTTAACCCATTCCCTGTTGTGTGA 1593 0.447 MLSHNQQTKKTQTLDSTTQGMAFQVLFICLISTIVFASILWRKQNKNKTLLPPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQQETNKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRLEKIRDCFDTVLDRIIKQREEERRNNNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLLFRESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDSDNGKVNMEEKAGITLPRAHPIICVPIPRLNPFPVV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1202 530 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 528 - -
Gso3g1202 530 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 528 - -
Gso3g1202 530 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gso3g1202 530 SUPERFAMILY Cytochrome P450 52 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 Pfam Cytochrome P450 52 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1202 530 Gene3D Cytochrome P450 37 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1202 Gso-Chr3 37676235 37678338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1202 25 523 Cytochrome P450 AT5G06900 48.800 8.91e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1202 K24188 - gmx:100815706 1000.35