Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1200 ATGGATGCTGCTGTCCCTTATCACACGAAGCACAAACAACCAAGTCCACCAGCACTTTTCAATGGCCCTTATTGGCGCTTCATCAAGAAGCTTTGCATGACTCAGCTTCTCTCGAGCTCGCAGGTCGCGCACTTCGTGCACGTGCGAGAGCAGGAGATAAATAGCCTCTTGAAAAATGTCATGGTTTGTTCCAATGAAGGTAGGGTTATGGATTTGAGCTTTGAGCTCACTGCTTTGACCAACAATATCTTGTGTCGGATGGCTATGAGCACTAGCTGTTTGGACAGAGTTGATGATGCTGCGGAGGTTCTTGGCTTGGTGAGGGAGTTTTTGGGGAAATTTGACTATTTTGGCTATGGGAAGAAGCTTGTCAGAATAGTTGACAGATTTGATAAGGTTTTGGAGCGTATCTTGGAGGAACATGAAGTGAAAAACACGGGACATGATGGATATTCTGTTTCAAGATATTTTCCTAGCGGGTTGCAATGGGCAATGGCGGAAATCATGAACAACCCAGGAGTGTTTGAAAAGGTGAAGGCAGAGATTAACACAGTGGTGGGAACTAACAGGTTGGTCAACGAACCAGACATTCCAAATCTACGTTACCTCCAAGCTGTCGTGAAGGAAGTTTTAAGACTCCATCCAACGGCGGAGAGAGGGTTTGTATGGAAGAAGGGTCCTCGTTTTCTACTGGATTGGCAAAGCCTCTTGTTTGTTCCCCTGTCACTTGTTTCAATCCTTTTTAACTCAACTTTCCAAAAAATAATGACATAG 774 0.4483 MDAAVPYHTKHKQPSPPALFNGPYWRFIKKLCMTQLLSSSQVAHFVHVREQEINSLLKNVMVCSNEGRVMDLSFELTALTNNILCRMAMSTSCLDRVDDAAEVLGLVREFLGKFDYFGYGKKLVRIVDRFDKVLERILEEHEVKNTGHDGYSVSRYFPSGLQWAMAEIMNNPGVFEKVKAEINTVVGTNRLVNEPDIPNLRYLQAVVKEVLRLHPTAERGFVWKKGPRFLLDWQSLLFVPLSLVSILFNSTFQKIMT* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1200 257 Gene3D Cytochrome P450 6 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1200 257 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 160 217 - -
Gso3g1200 257 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 22 146 - -
Gso3g1200 257 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 22 146 - -
Gso3g1200 257 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 160 217 - -
Gso3g1200 257 PRINTS E-class P450 group I signature 161 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1200 257 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1200 257 SUPERFAMILY Cytochrome P450 19 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1200 257 Gene3D Cytochrome P450 158 224 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1200 257 Pfam Cytochrome P450 5 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1200 257 Pfam Cytochrome P450 159 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1200 Gso-Chr3 37670840 37672178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1200 22 217 Cytochrome P450 AT2G42250 39.024 5.85e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1200 - - gsj:114405238 521.546