Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1192 ATGGAGTCTCACGATGAGACTGGATGCCAGGCTCCTGAACGCCCCATTCTTTGCATTAATAATTGTGGCTTCTTTGGAAGAGCAGCTACCATGAACATGTGTTCCAAGTGTTACAAGGACATGCTGTTGAAGCAGGAGCAGGACAATTTTGCAGCATCGTCGGTTGAAAACATTGTGAATGGCAGTTCCAATGGCAATGGGGCTGTGACTACTGGTGCTGTTGATGTACAAGTTGAAGCTGTGGAGGTCAAGACTGTCTCTGCTCAGAGTTCTGTAGATTCATCCTCCGGTGAGAGTTTGGAGATGAAAGCCAAGAACAGTCCCAGTAGATGCGCTACATGCCGGAAACGTGTTGGGTTAACTGGTTTCAGCTGCAAATGTGGCAACCTCTTCTGTGCAATGCATCGCTATTCTGATAAACATGAATGCCCTTTTGATTATAGGACTGTTGGTCAGGATGCCATAGCTAAAGCCAACCCGATAGTTAAGGCAGATAAGCTTGACAAAATCTAG 513 0.462 MESHDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQDNFAASSVENIVNGSSNGNGAVTTGAVDVQVEAVEVKTVSAQSSVDSSSGESLEMKAKNSPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHECPFDYRTVGQDAIAKANPIVKADKLDKI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1192 170 Gene3D - 1 63 - -
Gso3g1192 170 Gene3D - 84 166 IPR035896 -
Gso3g1192 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 55 - -
Gso3g1192 170 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 2 170 - -
Gso3g1192 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 170 - -
Gso3g1192 170 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Gso3g1192 170 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Gso3g1192 170 SUPERFAMILY AN1-like Zinc finger 102 165 IPR035896 -
Gso3g1192 170 Pfam AN1-like Zinc finger 111 147 IPR000058 GO:0008270
Gso3g1192 170 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Gso3g1192 170 SMART AN1_Zf_4 111 148 IPR000058 GO:0008270
Gso3g1192 170 ProSiteProfiles Zinc finger AN1-type profile. 105 151 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1192 Gso-Chr3 37527468 37529961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1192 5 170 C2H2 Transcription Factor Family AT3G52800 42.045 2.62e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1192 - - gmx:100306347 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1192 3 37527468 37529961 Gso3g1192 3 37527468 37529961 ECH
Gso3g1192 3 37527468 37529961 Gso11g1123 11 10133232 10135986 ECH