Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1191 ATGGAGATAGAGAACGGTGACACCAGGTCCAAAAAGATGGAAGAGTATCAAGTCATAGAGCAAATTGGAAGAGGAGCTTTTGGCTCTGCCTTCCTCGTTCTTCACAAGTCCGAGAAAAAGAGGTATGTGCTGAAAAAAATTCGGTTGGCCAAGCAGACAGAGAAGTTCAAACGTACAGCATTCCAAGAGATGGACCTGATTGCCAAACTGAATAACCCATATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGACCACATATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGGCAGAGAACATAAAGAAAGCTCGAGGTTCATTTTTTCCTGAAGAGAAAGTCTGCAAATGGCTGACTCAGTTGTTGATAGCTGTAGACTACTTGCACTCTAATCGTGTAATCCACAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGACAACAACATTCGGCTTGGTGACTTTGGTCTTGCTAAGCGACTTAATGCAGAAGATCTTGCTTCCTCGGTTGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTTGCAGATATACCTTATGGGTATAAATCTGATATGTGGTCTCTTGGTTGCTGCATGTTTGAGATTGCTGCACATCAACCAGCATTTCGCGCTCCAGACATGGCTGGACTTATCAATAAAATAAACAGATCCTCCATTTCTCCACTGCCAATTGTTTATTCTTCCACACTGAAACAACTTATCAAAAGCATGCTTAGGAAAAACCCAGAACATAGGCCAACTGCAGCTGAATTGTTAAGGCATCCGCTTTTACAGCCTTATGTTCTTCGCTGTCATAATGCATCATCTAATGTTCTTCCAGTATATCCCTTAGTTAATCCAAAGGATAAAACAAGAAGATCTAATAAATCTAGTGGTGGCAAGGACCATAAGGACAAAGAAGCTAGTTTGGTAAATCGTTTGGAGCGGATTCATCCAATTGAGGGAAATGGAGATATACAGATAAGCAATCTTCCTAATGATGCGGTAACAATCTCAACCAGTGCAGAAGACAATCTAGAGACCAGGATGGCTGATCTTACCAGCTACATAGTGGAATCTTGTACTAGTATTAGTGGCTCAAAAGATGGGTCAACAACATCTGAATCAACTATTTGCAGTGTGTGCAAGGAGGACTTTAAAAGTAGACCTGCAAGGGAAACGGCTAACAATGAGATCTCTTCTAAGAGTACACAAAATTCTATGCATGAAAAACAAAGATTTGCTGCTAAACATTTTCATAAATTAGAAGAAGACAACATAAATGTGGCGACCACAGAAGTTGAAGATGCTTCTTGCAATGAAGGTTTGGATAGTGCTGAAGCACAGAGGGAAGATTCGAACTTTGAGGACTCAGGTAAATCCACAATGTCCAGTGCAGGCAGTAGCACTGATAAAGATAAGTCCATCAATGAGGAAAGTTCATCACTGATTATGCATCCTATTAGGGTTGAACATGACACTGAATCTGGAAACCACTCGAAGAAAAGCAAAACCCCTGATGTATTTACAGAAGTCTCTCATATGAACTGCTTGACATCTTTTAGTAATGATGCACTTCCAGTTAAGGATGATGACATGGCAAACGTACACATTCTTTGCTCCACGCATAAAGAAGATGATAATGCGGTGGAGGTTGATCAGGCACCAAGAGGTGTTTCATTGAGTGTAATAACTGCAGTAGATGGTGATGAAACAATCAAGACTCCGGTGGATAGTCCCTGCCAGCAAAGAGCGGATGCTCTGGAATCTCTGCTCGAATTATGTGCTCAGCTACTCAAGCAAGATAAACTCGATGAGCTTGCTGGGGTGCTAAGACCATTTGGGAAAGAAGCTGTCTCATCAAGAGAAACAGCAATATGGCTGGCAAAAAGCCTCATGTCTGCCCAAAAGTTTAATGCTGAAGCCTAA 1947 0.416 MEIENGDTRSKKMEEYQVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKRTAFQEMDLIAKLNNPYIVEYKDAWVEKEDHICIITGYCEGGDMAENIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNAEDLASSVVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCHNASSNVLPVYPLVNPKDKTRRSNKSSGGKDHKDKEASLVNRLERIHPIEGNGDIQISNLPNDAVTISTSAEDNLETRMADLTSYIVESCTSISGSKDGSTTSESTICSVCKEDFKSRPARETANNEISSKSTQNSMHEKQRFAAKHFHKLEEDNINVATTEVEDASCNEGLDSAEAQREDSNFEDSGKSTMSSAGSSTDKDKSINEESSSLIMHPIRVEHDTESGNHSKKSKTPDVFTEVSHMNCLTSFSNDALPVKDDDMANVHILCSTHKEDDNAVEVDQAPRGVSLSVITAVDGDETIKTPVDSPCQQRADALESLLELCAQLLKQDKLDELAGVLRPFGKEAVSSRETAIWLAKSLMSAQKFNAEA* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1191 648 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 10 486 - -
Gso3g1191 648 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 489 631 - -
Gso3g1191 648 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gso3g1191 648 MobiDBLite consensus disorder prediction 395 418 - -
Gso3g1191 648 MobiDBLite consensus disorder prediction 295 316 - -
Gso3g1191 648 MobiDBLite consensus disorder prediction 451 513 - -
Gso3g1191 648 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 489 631 - -
Gso3g1191 648 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 10 486 - -
Gso3g1191 648 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1191 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Gso3g1191 648 CDD STKc_Nek 16 270 - -
Gso3g1191 648 MobiDBLite consensus disorder prediction 288 316 - -
Gso3g1191 648 Gene3D Transferase(Phosphotransferase) domain 1 98 322 - -
Gso3g1191 648 SUPERFAMILY Protein kinase-like (PK-like) 13 299 IPR011009 -
Gso3g1191 648 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1191 648 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1191 648 MobiDBLite consensus disorder prediction 399 416 - -
Gso3g1191 648 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Gso3g1191 648 MobiDBLite consensus disorder prediction 478 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1191 Gso-Chr3 37504668 37510248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1191 9 271 MAP Kinase Kinase Kinase AT3G13530 32.830 8.45e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Gso3g1191 Pkinase 2.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1191 K08857 - gmx:100777214 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1191 3 37504668 37510248 Gso3g1191 3 37504668 37510248 ECH
Gso19g1188 19 40326915 40333161 Gso3g1191 3 37504668 37510248 GST
Gso3g1191 3 37504668 37510248 Gso2g1537 2 32432435 32441729 PCT
Gso2g1537 2 32432435 32441729 Gso3g1191 3 37504668 37510248 PCT