Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1180 ATGCTTGAAAAGGAGTGTCTTTTTAGATCACCATTGTTGCTATGTATTTTGGTTGGCTTCTTGCTACTTCCTGTTGTGTCAGCTGTGATACCATTGGGTTCAAAACTTTCTGTGGTTGACAATAACTGTTGGGTTTCCTCCAATGGTGATTTTGCATTTGGGCTCTTTAACATTTCAGATGAACCTAATCAGTTTAGTGCTGGCATTCGTTTCAATTCAAAGTCTATACCGTATGACCAACAAACAGTGGTCTGGGTTGCTGGAGCTCATGACAAAGTGAGTAACATGTCCTATTTCCAACTCACACCTGAAGGGGAACTGATCCTGTTTGATTCCTTAAAAGGATTCATTGCATGGAGGAGTGGAACTGGCAACAGAGCTGTTGCTTCAGCTGCTCTTCGTGATAATGGCAATCTTGTTCTGATAGACACAAAACAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTCCTTCCCGGACAGAGTTTATCTGTTTATGAGACACTTCGGGCTACAACCAAGAACCCCATGTCTAGTTCCTACACTCTTTACATGAATCCTTCTGGTCAATTGCAGCTTCGCTGGGATAGTCATGTCATATATTGGACAAGTGAAAGCCCTTCTTCTGCTTCAAATCTGACTGCATTTCTTACAAATGGTGGAGCTTTGCAACTTCAAGACCAAAGTTTAAAAGCTGTTTGGAGTGTGTTTGGAGAAGACCATAATGATTCTGTGAATTACCGATTTCTTAGGCTAGATGTGGATGGCAATCTCCGCTTGTATTCTTGGATTGAAGCTTCACAATCATGGAGATCAGTCTGGCAAGCTGTTGAGAATCAGTGCAAAGTCTTTGCAACATGCAGTCAGCGTGGTGTCTGTATCTTCACTGCTTCAGGTTCTACTGATTGTTGGTGCCCTTTTGAGGTAACTGAGTCTAACCAATGTTTGGTTCCATATGAACAGGAGTGTGAGTCTGGATCCAATATGCTTATGTACAAAAACACATATCTTTACGGAATTTATCCTCCTGATGATTCAGTTGTCATAAGTAGTTTGCAGCAATGTGAGCAGTTATGTCTGAATGACACGCAGTGTACGGTTGCAACATTTTCCAACAATGGTAGACCACAATGCTCCATAAAGAAAACTAAGTATGTTACTGGCTATGCAGTTCCATCTCTAAACTCGATATCTTTTGTTAAAAGGTGTTCAGGTCCATTTGCTGTAAATCCTGGTCTCACAAAGTCACCTCCACCGAAACTGCCTCGTAGGCTTTGTGTTCCTTGTCTGATGGGAGCAGCCTCAGGAACATTTTTCATCTTTGCTATCCTCCAGCTGGGAATTATTTTCATCATCTTCAGAAGAAAAAACTCCACTATGCGAAATGTTGCTATAGCTTTCACAAGCCCAAATGCAAAAGGCTTAAATGTGTTCTCCTTCTCAGAAATCAAGAGCCTCACTGGGGATCTCAAGGATCAAATTGGGCCAAACATGTTCAAGGGTGTGCTACCGAACAATCACCTGATTGCAGTTAAAGACCTGAATGCATCCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTATGAAGTTGGGCAACATCCACCACAAGAACCTTGTGAAGCTGGAAGGTTATTGTTGCGAGTTTAACCATAGATTTTTGGTGTATGAATATGTCAAAATCGGTTCACTGCATAAATACATAAATGATTGTACCCTTTGCAAGAGGCTAACTTGGAGAAAGAGAATTGAAATATGCTCAAGTGTGGCAAAGGCCATTTGTTATTTGCACACTGGATGTAGGGAGTTCGTGAGCCATGGAAATTTAAAATGTGAGAATGTCATGTTGGATGAAAATTCAGTGGCCAAGGTGTGTGAATATGGGTTTGCAATAGCGGATGGTGAGGCCACATATCGTGGCTTTTCAGCTGAGAAGGATGTGGGGGATTTTGGAAAGTTAGCGTTAACGTTGTTCACAGGGTGTCTAGTTCATGAGCAACTTTATGAGTGGGCTTATACAGAATGGATGGAAGGTAGGGCAGTTAATGTTGTTGATAAAAGACTTGATGGTGTTGTCAATTCAGAGGAACTGGAGCGTGCGTTAAGAATCTCATTCTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTCTATGGAGGAGGTAGTGAGAGTACTAGATGGTACATTGAACGTTGATCCACCACCGCCGCCATTTGTCTTGCACAGGCCGTTACAGGAAGATGATCCACAAGAAAATGGTTCAGATTAA 2274 0.4186 MLEKECLFRSPLLLCILVGFLLLPVVSAVIPLGSKLSVVDNNCWVSSNGDFAFGLFNISDEPNQFSAGIRFNSKSIPYDQQTVVWVAGAHDKVSNMSYFQLTPEGELILFDSLKGFIAWRSGTGNRAVASAALRDNGNLVLIDTKQNIIWQSFDTPSDTLLPGQSLSVYETLRATTKNPMSSSYTLYMNPSGQLQLRWDSHVIYWTSESPSSASNLTAFLTNGGALQLQDQSLKAVWSVFGEDHNDSVNYRFLRLDVDGNLRLYSWIEASQSWRSVWQAVENQCKVFATCSQRGVCIFTASGSTDCWCPFEVTESNQCLVPYEQECESGSNMLMYKNTYLYGIYPPDDSVVISSLQQCEQLCLNDTQCTVATFSNNGRPQCSIKKTKYVTGYAVPSLNSISFVKRCSGPFAVNPGLTKSPPPKLPRRLCVPCLMGAASGTFFIFAILQLGIIFIIFRRKNSTMRNVAIAFTSPNAKGLNVFSFSEIKSLTGDLKDQIGPNMFKGVLPNNHLIAVKDLNASIEERKFRSAVMKLGNIHHKNLVKLEGYCCEFNHRFLVYEYVKIGSLHKYINDCTLCKRLTWRKRIEICSSVAKAICYLHTGCREFVSHGNLKCENVMLDENSVAKVCEYGFAIADGEATYRGFSAEKDVGDFGKLALTLFTGCLVHEQLYEWAYTEWMEGRAVNVVDKRLDGVVNSEELERALRISFWCLQMDERRRPSMEEVVRVLDGTLNVDPPPPPFVLHRPLQEDDPQENGSD* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1180 757 Pfam PAN domain 336 401 IPR003609 -
Gso3g1180 757 SMART ntp_6 327 405 IPR003609 -
Gso3g1180 757 Gene3D - 156 275 IPR036426 -
Gso3g1180 757 PANTHER OS07G0415500 PROTEIN 8 756 - -
Gso3g1180 757 PIRSF SRK 658 757 IPR024171 GO:0004674
Gso3g1180 757 PIRSF SRK 4 656 IPR024171 GO:0004674
Gso3g1180 757 ProSiteProfiles Protein kinase domain profile. 441 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1180 757 Pfam S-locus glycoprotein domain 245 308 IPR000858 GO:0048544
Gso3g1180 757 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 8 756 - -
Gso3g1180 757 ProSiteProfiles Bulb-type lectin domain profile. 157 276 IPR001480 -
Gso3g1180 757 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Gso3g1180 757 MobiDBLite consensus disorder prediction 735 757 - -
Gso3g1180 757 Pfam Protein tyrosine and serine/threonine kinase 509 634 IPR001245 GO:0004672|GO:0006468
Gso3g1180 757 SMART blect_4 35 156 IPR001480 -
Gso3g1180 757 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 167 IPR036426 -
Gso3g1180 757 Gene3D Phosphorylase Kinase; domain 1 455 560 - -
Gso3g1180 757 Gene3D Transferase(Phosphotransferase) domain 1 562 639 - -
Gso3g1180 757 Gene3D Transferase(Phosphotransferase) domain 1 640 735 - -
Gso3g1180 757 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Gso3g1180 757 SUPERFAMILY alpha-D-mannose-specific plant lectins 174 275 IPR036426 -
Gso3g1180 757 Gene3D - 28 155 IPR036426 -
Gso3g1180 757 CDD B_lectin 45 156 IPR001480 -
Gso3g1180 757 Pfam D-mannose binding lectin 82 169 IPR001480 -
Gso3g1180 757 Gene3D Hepatocyte Growth Factor 332 408 - -
Gso3g1180 757 SUPERFAMILY Protein kinase-like (PK-like) 502 747 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1180 Gso-Chr3 37360876 37364691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1180 474 727 Receptor kinase-like Gene Family AT3G19300 31.707 2.51e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso3g1180 PK_Tyr_Ser-Thr 8.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1180 - - gmx:100809478 1542.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1180 3 37360876 37364691 Gso3g1180 3 37360876 37364691 ECH