Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1157 ATGGTGATGATATGGGAAGATGTAACAGTTGAGAGGCCTGAAAGTTTTGGAGAACACAATAACAATAAGAAGTTAATGCTGAATGGAATCACTGGTTTTGCTGAACCTGCTAGGATTATGGCTGTTATGGGTCCTTCTGGCTGCGGCAAAACTACCTTTCTTGACTCTTTCACTGGAAAACTTGCTGCAAATGTTGTAGTAACCGGCAACATTCTAATCAATGGGAAGAAGAAAAGCTTTTATTCCAAAGAAGTGTCCTACGTGGCACAAGAGGAACTTTTCTTGGGTACTTTGACTGTAAAAGAGACCCTCACATACTCGGCAAACATAAGGCTTCCTTCTAAAATGACCAAAGAAGAGATAAACAAAGTGGTGGAAAATACCATAATGGAAATGGGTCTGGAAGATTGTGCAGATACTAGGATTGGAAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGACTTGAAATTCTGACACAACCATATGTCTTACTTCTTGATGAACCTACTACTGGACTTGATAGTGCCTCAGCTTTCTATGTGGTTCAATCTCTATGCCACATTGCTCACAGTGGAAAGATAGTTATCTGTTCTATTCACCAGCCCAGTAGTGAGATTTTTAGTCTGTTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTCTAAAGTTTTTTGCTGATGCAGGTTTCCCCTGCCCTACTAGAAGAAATCCTTCAGATCATTTCCTTATGTGTATTAATTTGGACTTTGAGTTGATTACTGAAGCACTACAGAGGACACAGTTAAATTTGATACCAACAAATTCAACAATTGGAATGAGAACATCAGAGATCAGAAGGATACTCATTCAGAGTTACAAAAGTTCAAAGCTAATGATCAATGCAAGAAAAAGAATTGAACAACTGAAACCCAATGAAGAACAAGAAATTAAGCCCTACATAGGTAGCAGTACCACATGGAGGAAGCAATTATGTACATTGACTGAGAGATCTTTCCTAAACATGACTAGGGATATTGGTTACTACTGGCTGAGGATTGTATTCTACATACTGGTAGGAATTACTATTGGCACCCTCTTTTTTCATATTGGCACAGGCAACAACTCAATCTTGGCTAGAGGAAAGTGTGTATCATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTTTTCTATGGTGAAAGGTCCAAAGGACATTATGGAGAGGCTGCATTTGTAGTGTCAAACATCATATCTTCATTCCCTTTCCTTGTTCTAACATCACTCTCCTCCGGAATAATCATTTACTTCATGGTGCAATTTCATCCGGGTTTATCTAATTGTGCATTTTTCTGTATCAACTTATTCTGCTGCCTATCTGTTGTTGAGTGCTGCATCATGATTGTTGCCTCAGTGGTCCCCAATGTGCTGATGGGCATAGGAACAGGAACTGGTGTAATTGTCTTCATGATGATGCCCTCTCAAATATTCAGATCATTACCTGACATTCCAAAGTTCTTCTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTGCTTGGGCAGTGCAGGGACAATACAAGAATGACATGCTGGGGGTTGAATTTGATCCTTTGCTGCCAGGAGATGCTAAAGTTAGTGGAGAACAAGTGCTATCATTGGTATTTGGTGTTCCATTGGATCATAACAAATGGTGGGACTTAACAGCATTGGCTACCTTATTATTAGTTCACAGATTGGTTCTTTACTTGGTGCTTCGGTTTGTCAAAAGAGCTCAATCACCTAAACTGTGGTTCTATGCCAAGAAAAGTTTACACTTTGCAGGAAGATGTTTCTTCAGTAAGAAGCCATCTATCTCTTCCAGGAAACAAGCTCAGCATCCATTATCATCTCAAGAGGGTCTAATGTCCCCAAACCTTGCAATATAA 1986 0.3958 MVMIWEDVTVERPESFGEHNNNKKLMLNGITGFAEPARIMAVMGPSGCGKTTFLDSFTGKLAANVVVTGNILINGKKKSFYSKEVSYVAQEELFLGTLTVKETLTYSANIRLPSKMTKEEINKVVENTIMEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPYVLLLDEPTTGLDSASAFYVVQSLCHIAHSGKIVICSIHQPSSEIFSLFDDLLLLSSGETVYFGEAKMALKFFADAGFPCPTRRNPSDHFLMCINLDFELITEALQRTQLNLIPTNSTIGMRTSEIRRILIQSYKSSKLMINARKRIEQLKPNEEQEIKPYIGSSTTWRKQLCTLTERSFLNMTRDIGYYWLRIVFYILVGITIGTLFFHIGTGNNSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNIISSFPFLVLTSLSSGIIIYFMVQFHPGLSNCAFFCINLFCCLSVVECCIMIVASVVPNVLMGIGTGTGVIVFMMMPSQIFRSLPDIPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPLLPGDAKVSGEQVLSLVFGVPLDHNKWWDLTALATLLLVHRLVLYLVLRFVKRAQSPKLWFYAKKSLHFAGRCFFSKKPSISSRKQAQHPLSSQEGLMSPNLAI* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1157 661 SMART AAA_5 36 227 IPR003593 -
Gso3g1157 661 Pfam ABC-2 type transporter 339 544 IPR013525 GO:0016020|GO:0140359
Gso3g1157 661 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 250 IPR003439 GO:0005524
Gso3g1157 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 240 IPR027417 -
Gso3g1157 661 Pfam ABC-2 type transporter 207 261 IPR043926 GO:0140359
Gso3g1157 661 Pfam ABC transporter 34 177 IPR003439 GO:0005524
Gso3g1157 661 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 632 - -
Gso3g1157 661 Gene3D - 6 244 IPR027417 -
Gso3g1157 661 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1157 Gso-Chr3 36971421 36978739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1157 34 219 Calmodulin-binding Proteins AT2G36910 26.396 3.65e-10 61.6