Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1155 ATGGAGGATGGTTCAAGAAATAGGACTCATTTCAACATGGCTTCAAGAAAAGCTGAAGAATCTGCTTGGAGACGCTATGAGGCTACTCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGTATACCAAACCAGCCTACAGAGACAGAACTCATTTCTTGCTTGAGAAATGGTTTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAGGTTGTCGTTGTGGATAATCAAGTGCCTTCACAATCACTTGCCTGGGATTCTCAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTACGCAATTTTCTGTTTGTCATGGAAGAATTAAAGCTTCCGGCTTTTGAAGTTTCTGATCTTGAAAGGGATAATCTAGAGATGGGATCGGCAGCAAAACTCGTTGATTGCATTTTGGCACTTAAATCATTTCAAGAGTTGAAGCAGATGAACAAACAGAATGGATACAACAAACACATAAAATCTCCTTTGCCTATGAGAATGCATTCAAGAGCAGCTGCATTCTCCTTTGATGCTTCTAGGCACTTGGATTTGTCTGCCACATTGGTAAAAATGCCTCCCGCTGAGAATAATTTTCCGAAAAGAGAAGAGATTGTGGAATTACTTGCCAAGCAACTGGTTGACCTTATGTTTGATGCCAAAGAAAATATCGATGGAAACATCATTGCTTCTCTCCATAAAGAACACCTGGTAGCGGATCCAATAAAGGTATTTAATCAGATAATGGCATGTTGTAATGGGGAACAGCCACCTACAAATTTCAACGAGTTGCCATTGCTTCTAAGGGATTCTGTAAAAGAAAAGGGTAACTTACCACCTCATTCCATTTCAACACCTACGCAATCAGATGCTTTATCTGCTCCTGACAGTTCTAAGCATGGCGAAGCTTGCCTCAGAAAGTGCAAGTGCAATCAGGTGCATCTTTTAGACATGCAGGAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGAGTTTCAAGAGATACAGTCACAGTTTCAAGGTTTTTTTCATGATATTGGGAGTCAAATACAGGAGATGTCAACTAAAGCTCTTGGATATCACAAAGTAGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCCGGGCTGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGATGGTTCTCTATTCATTTTAGATCCAACAAAAACACTAAAAGATGGAAGGAAACTTTTTCAGTTTAATCAGGTTTTTGGTCCAATAGCTGGCCAAGATGATGTTTATAAGGATACTCAACCATTAATTAGATCTGTGATGGATGGGTACAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCGGGGAAGACTTACACCATGAGTGGTCCTTCAGGTGGAGGGACATCAAAGGATATGGGAATCAATTATCTGGCACTTAATGATCTGTTTCAAATGTCTAATGAAAGGAAGGACATCATAAGCTATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTTAGAGACCTACTTGCAGAGGACAAAACAGACAACAAATTAGAAATTCGGAGCTGCAATGATGACGGGTTGAGCCTTCCTGACGCCATATTGCATTCAGTGAAGTCTCCAACTGATGTTATGACCCTCATGAAACTTGGTGAGGTTAATCGTGCCGTCAGTTCGACTGCAATGAACAATAGGAGTAGTCGTTCCCACAGTGTGCTTACTGTGCATGTTAATGGCAAAGATACATCTGGGAGCTCCATTCGCAGCTGCTTGCACTTAGTAGACCTTGCTGGAAGTGAACGGGTAGACAAGTCCGAGGTTACAGGGGAAAGACTAAAGGAAGCACAGTTTATTAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTATAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCCTTAGGTGGGCATGCTAAAACATTGATGTTTGCTCATGTGAGTCCGGAATCAGATTCATTTGGTGAAACAATGAGTACTCTAAAGTTTGCTCAGCGGGTTTCCACTGTGGAACTGGGGGCAGCCCGTATGAACAAAGAAAGCAGCGAGGTTATGCATCTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAGCCAAGGAAGCTCAGAGGGTAACGTTCCAAAGAATTAAAGAACCACACACTCCATCAGAGAAGTCAACACTGGTGTCTGAGAAAACTCCATTGCGCCCACGAAGACTTAGCATTGAGAACTGCAGCGCTGTAAAGACTGACAAACCCGTGAATCGTGAGGATAGAGGTGGAGTCAAATCACCACTTTTGTTACCTCGCTTGAGAAGATTAAGTTTGGAAGGTTCAAAAACTATCAAGAGAGATAGTCTACTACCAAAAGTATCAGATAATGCTGTAAGCAAAGCTTTACAGTACGAGCGAGTGTCTCAGCAGAAATATCACCCAATGCAAGATCCAGAATCAGTGTCAAAACTAAATGGCCATTTCAGCAGTGGCAATTCCAGGTCAGAGTTGCATGCCAGAACCCCTCAAAGTCCAACAAGCATTTCCTATCAAACGAGATTGATAAAAGTAAATGGTGGGATGCAAGTTCATCCTCTTAAACTGCCCAAAACACCTGAACCACCAGTGGTGGATGGAGGCGATGCACATGGTACTAAGGTGATGGGTAGCACAAATGGAAAAGGATCGCAGATAAGAAGATCCTTGAGAACAATTGGGAAACTGATAAATGGCCCTGATAAGAGGAGCCAACAAAATATGGTTGAAGTCAAGTCACCCGTCAAGGGCACTGGCTATACAAATCATCTTGTAAAATCACCAATTTCAGCTGTTGAGAAGACTAAAAGGAGGCAATCTCTAACGGGGATTCAACCACCACTGCCAAACAACTCCCGTAGAACTTCACTTGGAGGGAAGCCAGTAGTAGCATATGACAAGGACAGAAATGCTAGAACTCCTCCTCCTTCCCAATCAGACAGCAAGACTGTGAAACGGTGGCTGTAG 3108 0.4199 MEDGSRNRTHFNMASRKAEESAWRRYEATQWLESQVGPLGIPNQPTETELISCLRNGLILCNAINKIHPGAVPKVVVVDNQVPSQSLAWDSQPLPAYQYFENVRNFLFVMEELKLPAFEVSDLERDNLEMGSAAKLVDCILALKSFQELKQMNKQNGYNKHIKSPLPMRMHSRAAAFSFDASRHLDLSATLVKMPPAENNFPKREEIVELLAKQLVDLMFDAKENIDGNIIASLHKEHLVADPIKVFNQIMACCNGEQPPTNFNELPLLLRDSVKEKGNLPPHSISTPTQSDALSAPDSSKHGEACLRKCKCNQVHLLDMQEKELLDLKALKLKIKKEFQEIQSQFQGFFHDIGSQIQEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPSFRAESKNVVDFIGEDGSLFILDPTKTLKDGRKLFQFNQVFGPIAGQDDVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGGTSKDMGINYLALNDLFQMSNERKDIISYDIYVQMVEIYNEQVRDLLAEDKTDNKLEIRSCNDDGLSLPDAILHSVKSPTDVMTLMKLGEVNRAVSSTAMNNRSSRSHSVLTVHVNGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPESDSFGETMSTLKFAQRVSTVELGAARMNKESSEVMHLKEQVENLKIALAAKEAQRVTFQRIKEPHTPSEKSTLVSEKTPLRPRRLSIENCSAVKTDKPVNREDRGGVKSPLLLPRLRRLSLEGSKTIKRDSLLPKVSDNAVSKALQYERVSQQKYHPMQDPESVSKLNGHFSSGNSRSELHARTPQSPTSISYQTRLIKVNGGMQVHPLKLPKTPEPPVVDGGDAHGTKVMGSTNGKGSQIRRSLRTIGKLINGPDKRSQQNMVEVKSPVKGTGYTNHLVKSPISAVEKTKRRQSLTGIQPPLPNNSRRTSLGGKPVVAYDKDRNARTPPPSQSDSKTVKRWL* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1155 1035 MobiDBLite consensus disorder prediction 844 882 - -
Gso3g1155 1035 SMART ch_5 24 146 IPR001715 GO:0005515
Gso3g1155 1035 Pfam Calponin homology (CH) domain 24 144 IPR001715 GO:0005515
Gso3g1155 1035 MobiDBLite consensus disorder prediction 277 298 - -
Gso3g1155 1035 Coils Coil 719 746 - -
Gso3g1155 1035 PANTHER KINESIN-LIKE PROTEIN KIN-14L 7 1023 - -
Gso3g1155 1035 MobiDBLite consensus disorder prediction 979 1035 - -
Gso3g1155 1035 MobiDBLite consensus disorder prediction 280 297 - -
Gso3g1155 1035 MobiDBLite consensus disorder prediction 981 1004 - -
Gso3g1155 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 711 IPR027417 -
Gso3g1155 1035 Coils Coil 318 338 - -
Gso3g1155 1035 Gene3D Kinesin motor domain 329 714 IPR036961 -
Gso3g1155 1035 PRINTS Kinesin heavy chain signature 460 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 PRINTS Kinesin heavy chain signature 583 600 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 PRINTS Kinesin heavy chain signature 613 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 PRINTS Kinesin heavy chain signature 662 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 Gene3D - 10 164 IPR036872 -
Gso3g1155 1035 MobiDBLite consensus disorder prediction 1019 1035 - -
Gso3g1155 1035 ProSiteProfiles Calponin homology (CH) domain profile. 22 148 IPR001715 GO:0005515
Gso3g1155 1035 SMART kinesin_4 385 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 Pfam Kinesin motor domain 393 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 ProSiteProfiles Kinesin motor domain profile. 387 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g1155 1035 SUPERFAMILY Calponin-homology domain, CH-domain 19 155 IPR036872 -
Gso3g1155 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1155 Gso-Chr3 36936057 36944056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1155 317 712 Calmodulin-binding Proteins AT5G65930 40.299 1.37e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1155 K10406 - gmx:100812493 2004.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1155 3 36936057 36944056 Gso3g1155 3 36936057 36944056 ECH
Gso19g1155 19 39787074 39799626 Gso3g1155 3 36936057 36944056 GST