Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1114 ATGGGGATGGCTGCAGCGGAGTCACAGTTTCATGTCTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGCGTGAGAATGATGAGAGCAATCCAAGTATACCATCTGTTTGTCCCAACAACCATCAGCCTCAGGAGGTGGAGGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAACAGATGTTTGGAGGAAGGAGCCGAAGAATTTTTCTTGAAGCCTGTGAGGTTGTCAGATTTGAACAAGCTTAAACCCCACATGAAGAAAACCAAGTTCAAAGATCAAAAGCAAGAAACAGTAGAAAGGTTTGAAGACTCAGAAGTTCAACAGCAACAGTCACAACAACAAATCATCATCCAAAATGAGCATCACCAAGCACCAAAATTACAAGTTCTTCAGCCAGAGTCAGAATCAGAGTCACATCCACAACCAACTATTGAACAACAGCAACAAATTCTACAACAAGCCAACAACAATAACAAGAGGAAGACCATGGAACAGGGCCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 747 0.4217 MGMAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPSIPSVCPNNHQPQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKFKDQKQETVERFEDSEVQQQQSQQQIIIQNEHHQAPKLQVLQPESESESHPQPTIEQQQQILQQANNNNKRKTMEQGLSPETDRTRPRYSGIATVV* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1114 248 MobiDBLite consensus disorder prediction 192 227 - -
Gso3g1114 248 SUPERFAMILY CheY-like 9 148 IPR011006 -
Gso3g1114 248 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 244 IPR045279 GO:0009736
Gso3g1114 248 Coils Coil 207 227 - -
Gso3g1114 248 Pfam Response regulator receiver domain 12 143 IPR001789 GO:0000160
Gso3g1114 248 MobiDBLite consensus disorder prediction 192 248 - -
Gso3g1114 248 CDD REC_typeA_ARR 12 144 - -
Gso3g1114 248 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 2 244 - -
Gso3g1114 248 Gene3D - 11 238 - -
Gso3g1114 248 ProSiteProfiles Response regulatory domain profile. 11 149 IPR001789 GO:0000160
Gso3g1114 248 SMART REC_2 10 145 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1114 Gso-Chr3 36380524 36382741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1114 1 248 Response Regulator Gene Family AT3G57040 61.044 6.26e-96 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso3g1114 Response_reg 2.7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1114 K14492 - gmx:100788079 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1109 19 39201104 39203312 Gso3g1114 3 36380524 36382741 GST