Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1100 ATGAATGGAAATGGCGCTATGGCATTTGATGTAGAGTACGCACGATGGTTAGAAGAGCATAATAGACAAACCAATGAGCTAAGGACTGCAATAAATTCTCATGCTGGAGATATTGAACTTCGAACCATTGTTGACAATTTCGTGACGCAGTTTAATGATATCTTCAGGCTGAAAGCTATTGCAGCAAAAGCTGATTCTTGCCAGATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGCCATCCGAACTCTTCAAGCTTCTTCTAAGTCAGTTGGAGCCTTTAGTCGAGCAACAGATGGATATCTACAGCTTTCAGCAATCATGCCAGCAGGCTGAAGAAGCTCTTTCCCAAGGGATGGATGCATTGCAGCAATCAGTATCTGAGACATTGGCTAATGGTTCGCCCAGCTCATCAGGCTCCCCGGGAAATGTGGCAAATAACATGGGTCAAATAACTATGGCCATGGGAAAGCTTGGTACACTTGAGGGGTTTCTTCTCCAGGCTGACAATCTGCGGCAGCGGACATTAGAAGTAATGCTTCAAATATTAACGACCAGGCAATCGGCTCGTGCTCTTCTTGCCATCAGTGATTATTTCTCACGGCTGAGAGAGCTGGGTTCTTTGTGGCCTTCCAGGCCAAGGGAGTGA 678 0.4631 MNGNGAMAFDVEYARWLEEHNRQTNELRTAINSHAGDIELRTIVDNFVTQFNDIFRLKAIAAKADSCQILSGMWKTPAERCFMWIGGFRPSELFKLLLSQLEPLVEQQMDIYSFQQSCQQAEEALSQGMDALQQSVSETLANGSPSSSGSPGNVANNMGQITMAMGKLGTLEGFLLQADNLRQRTLEVMLQILTTRQSARALLAISDYFSRLRELGSLWPSRPRE* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1100 225 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 1 225 - -
Gso3g1100 225 Pfam Seed dormancy control 23 98 IPR025422 GO:0006351|GO:0043565
Gso3g1100 225 ProSiteProfiles DOG1 domain profile. 6 222 IPR025422 GO:0006351|GO:0043565
Gso3g1100 225 PANTHER TRANSCRIPTION FACTOR TGA9 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1100 Gso-Chr3 36167546 36170623 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1100 3 225 bZIP Transcription Factor Family AT3G12250 66.071 1.80e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1100 K14431 - gmx:100801838 440.269