Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1075 ATGTTTCCCCAGCCATGGATCTTCTTGATAGCCACCATCATTGCAATTTCACTGTTCATGTCCTCACTGGTTGAGTCATTTCCAGTAGCTGATAAGGTCAAATCCTTGCCTGAACAGTTACCTGTTTCCTTCCAACAATTTGCTGGCTTTGTACCCGTTGATGACAAGAACCAGAGAGCTCTTTTTTACTACTTTGTTGAAGCAGAAACCAACCCTGCTTCAAAGCCTCTAGTTCTCTGGCTCAATGGAGGGCCTGGTTGTACATCTGTAGGAGTTGGAGCCTTCACAGAACATGGTCCTTTTGTTACAAATCAAGGAGAAGCTATTGAGAAAAATCAGTATAGTTGGAACAAAGAGGCAAACATTTTGTACCTAGAGTCACCAGCAGGCGTTGGATTCTCTTACTCTCTCAATTTGTCATTTTATAAAACACTGAACGATGAAATCACAGCCCGAGACAGTCTGGTTTTCCTGCGGCGCTGGTTTGCCAAGTTCCCAGAATACAAGAATAGAGATTTTTATATAACGGGAGAGAGTTATGGAGGTCACTATGTACCTCAACTTGCTGAACTCATAATTAAGAGTAAAGTGAATTTCAACCTAAAGGGCATAGCAATAGGAAACCCTCTTCTGGATTTCGACACTGATATGAATGCAGTCGATGAATATTACTGGTCTCATGGAATAATAAGTGATTATGCATACAAAATCAGGACCTCTCTATGTAACTCGTCTAGAGTATTAAGAGAATACTTCAGTGGCCAAATTTCCAAAGATTGTCTTGTTGCAGCTCAAAAAGTCTCAGAAGAATATTCTTTTACAAATTTCATCGACCCATATTACGTTGTTGGGGAGAAATGTCTTTCTTACAATGTTTCTCAGGCAGGTTTTCTTAGGGAGACGCTAAATTCAGGGATGTTTCAGTTTAGGAACTCTCATTATGTGCTTCAAACAGAAGAACCTGACCAGCAAGTTGATGAGTGTAATTTGAAATATTCAGAGATGTACTTGAACAGGAAAGATGTGCAGAAGGCTCTCCATGCCCGGCTGGAGGGAACCACCAAATATCGTTTGTGCAGCAAGATTGTACAAACAAATTATGACCCATTGAACAGAGAGATACCAACAATTAATGTTGTCGGCTTCCTTGTAAAATCAGGTCTTCGAGTCATCGTATACAGTGGGGATCAAGACTCTGTGATTCCATTCATGGGCACGAGAAGATTGGTTGATAGACTAGCAAAGACACTAGGACTTAAAACAACCCTGCCTTACAGTGCCTGGTTTGTGGACAAGCAGGTTGGAGGATGGACACAAGTTTATGGCAATCACCTCACGTACACCACAATAAGAGGAGCTTCACATGGCACTCCAGCTACTCAACCAAAGAGATCTTTTGTTTTGTTTAATGCGTTTCTTCAAGGGAAACCACTCCCTAAAGCATGA 1446 0.4136 MFPQPWIFLIATIIAISLFMSSLVESFPVADKVKSLPEQLPVSFQQFAGFVPVDDKNQRALFYYFVEAETNPASKPLVLWLNGGPGCTSVGVGAFTEHGPFVTNQGEAIEKNQYSWNKEANILYLESPAGVGFSYSLNLSFYKTLNDEITARDSLVFLRRWFAKFPEYKNRDFYITGESYGGHYVPQLAELIIKSKVNFNLKGIAIGNPLLDFDTDMNAVDEYYWSHGIISDYAYKIRTSLCNSSRVLREYFSGQISKDCLVAAQKVSEEYSFTNFIDPYYVVGEKCLSYNVSQAGFLRETLNSGMFQFRNSHYVLQTEEPDQQVDECNLKYSEMYLNRKDVQKALHARLEGTTKYRLCSKIVQTNYDPLNREIPTINVVGFLVKSGLRVIVYSGDQDSVIPFMGTRRLVDRLAKTLGLKTTLPYSAWFVDKQVGGWTQVYGNHLTYTTIRGASHGTPATQPKRSFVLFNAFLQGKPLPKA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1075 481 Gene3D alpha/beta hydrolase 25 479 IPR029058 -
Gso3g1075 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 3 480 IPR001563 GO:0004185|GO:0006508
Gso3g1075 481 SUPERFAMILY alpha/beta-Hydrolases 37 479 IPR029058 -
Gso3g1075 481 PANTHER CARBOXYPEPTIDASE 3 480 - -
Gso3g1075 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gso3g1075 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gso3g1075 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Gso3g1075 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Gso3g1075 481 Pfam Serine carboxypeptidase 40 475 IPR001563 GO:0004185|GO:0006508
Gso3g1075 481 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1075 Gso-Chr3 35800052 35803997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1075 333 478 Calmodulin-binding Proteins AT2G22960 28.477 3.69e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1075 K16297 - gmx:100819443 967.992