Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1066 ATGGCATCAAGAGGTGAAGCAGTAGTATGGGGAGGAAAACAGCAGAAGAAGAAGAAGGGTATAGCGGTTGGAAGGAACCGCAAGATATTAGGTGATATTGGGAATTTAGTCAACCGCCCCATCACAAGGAGTTTTTCTGCTCAAATTCTTGCCAAAGTACAAGCAGCAGCCAAGAATAACAAGAAACAGGCTTCTGTCAAGGTAAAACCAAAGGCTGAGGAAGTGATTGACATTGAAGCTGGTCCAGACAAGGAGGTCCAGAAAAACAAGAACAAGGAATCACGCGCTTCTACTTCAGTTCTCACAGCTCGAAGCAACGCAGCATGTGACATAACAAACAAACCAAGGGAGCAGATTATTGACATTGACGCTTCTGATTCTGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACATTTGCAAGTTCTATAAGCTAGTTGAGAACGAGAACCACCCTCATGACTACATAGACTCACAACCTGAGATAGATCAGAGGTCGAGAGCTATTCTAGTTAATTGGCTGATAGATGTCCACACCAACCTTGACCTTTCACTTGAGACCATTTACCTGACCATCAACATAATTGATCGGTTCCTAGCTGTTAAGACAGTTCCAAGGTTGGAAATGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAATATGAAGAAATTTGGACTCTTGAGGTTGATGAATTAGTCCGCCTCACAGATTATACTCATGAACAGGTTCTGGTCATGGAGAAAACCATATTGAATAAGCTGGAATGGAATTTGACTGTGCCAACAACTTTTGTTTTCCTGGTTCGTTTCATCAAGGCATCAGTCCCAGATCAGGAGTTAGAAAACATGGCACATTTTCTGTCTGAGTTGGGAATGATGCACTATGCCACCTTAAAGTACTTCCCATCAATGGTTGCTGCCTCAGCAGTGTTTGCAGCTAGATGCACTCTGAATAAGGCTCCCCTTTGGACTGAGACACTTAAGCTGCACACTGGTTATTCACAAGGACAACTTATGGATTGTGCTAGATTATTGGTGAGCTTCCACTCCATGGCTGGGAATGGAGAGGAGAAGGTTGTGTACATAAAGTATTCTGATCCTGAGAAAGGAGCTGTTGCTATGCTTCCACCAGCTAAAAATCTTATGCCTGAAGGTTCTGACTCTCAGTAG 1179 0.4351 MASRGEAVVWGGKQQKKKKGIAVGRNRKILGDIGNLVNRPITRSFSAQILAKVQAAAKNNKKQASVKVKPKAEEVIDIEAGPDKEVQKNKNKESRASTSVLTARSNAACDITNKPREQIIDIDASDSDNELAAVEYIDDICKFYKLVENENHPHDYIDSQPEIDQRSRAILVNWLIDVHTNLDLSLETIYLTINIIDRFLAVKTVPRLEMQLVGISAMLMASKYEEIWTLEVDELVRLTDYTHEQVLVMEKTILNKLEWNLTVPTTFVFLVRFIKASVPDQELENMAHFLSELGMMHYATLKYFPSMVAASAVFAARCTLNKAPLWTETLKLHTGYSQGQLMDCARLLVSFHSMAGNGEEKVVYIKYSDPEKGAVAMLPPAKNLMPEGSDSQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1066 392 Gene3D - 153 262 - -
Gso3g1066 392 SUPERFAMILY Cyclin-like 263 382 IPR036915 -
Gso3g1066 392 ProSitePatterns Cyclins signature. 168 199 IPR006671 -
Gso3g1066 392 Gene3D - 139 376 - -
Gso3g1066 392 SMART cyclin_7 173 255 IPR013763 -
Gso3g1066 392 SMART cyclin_7 268 350 IPR013763 -
Gso3g1066 392 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 46 386 - -
Gso3g1066 392 SUPERFAMILY Cyclin-like 128 267 IPR036915 -
Gso3g1066 392 PANTHER CYCLINS 46 386 IPR039361 -
Gso3g1066 392 CDD CYCLIN 167 254 IPR013763 -
Gso3g1066 392 SMART Cyclin_C_2 264 381 IPR004367 -
Gso3g1066 392 CDD CYCLIN 262 349 IPR013763 -
Gso3g1066 392 Pfam Cyclin, N-terminal domain 139 262 IPR006671 -
Gso3g1066 392 PIRSF Cyclin_A_B_D_E 1 392 IPR039361 -
Gso3g1066 392 Pfam Cyclin, C-terminal domain 264 380 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1066 Gso-Chr3 35574504 35577322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1066 19 391 Core Cell Cycle Gene Families AT4G37490 51.106 3.30e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1066 K21777 - gmx:100789141 744.191