Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1061 ATGTACAGGGTTTTAGCGCGTGAACCACGCGCCCTGCTACAAATAACGAACGAAACCCCAAAAATTCCCAAAACCCATTTCTTCTCCTCCATTTCTCAGAAACCCTCTCGAATGACTGAGTCAATGCCCGCCGTGGAACCGTCGCCGGAGCCTCCGGCGTCCGATATCGTGTTCGATGACTTCTCCACCGACTTCAGCGCCTTCCCCATCCCCTCCATGGACTCGCTCTTCAACACTACTGATGGGCTCCCCTTCCCCTCCGATCTCGAATTCGGCATGGATTTCAACAACAACAACGGAGAATTCGAAATCACCTTCGACGACCTCGATGACATCTACATCCCCTCCGACGCCGAGGATTTCCTCCTCCCCGACGCCTGTAACCCTAATTACGCCTCCGTTTCGCCGCCCATCGACGATTCCTCCGCGAAGAATTCCGATTCCGACGCATCCGCGGTTTCCGGCGACGGCGTTTCCAGGTTTTTCAATTCGCAAGTGTCGGAATCTGATTCCGCCGATAATGTTAGGGTTCCGAGCGTTCCTTCGCCGGAGGCTGAATTCTGCGAACGGGAGGAGTCTTCCAACGGACCGGTTTCGTCGCAGGGTTCCGGCAACGGCGGATCGGGTGTATACGAGGCCATGCACTCGCCCTCACCTGATTCTGGCCCTTACGAGAGAGACATAACATCGTTTCATGCACATGCAGCTACAAACAATGGTGTGAAAATGGAGGAAGTTCCAGCTTTTGATCTGAAGAGGAAGAAAGGGAGTTGCGAGGGAAGTGCTACCAAGCACAGAAGGTTCTCTTCCTCTGTGGAGAATAATAATAATAATAAGACTGAGAAACAGTTTCAATCTGATTTGAATGGAATTGAAGACGAGGATGAGAAGAGGAAGGCGAGGTTGATGAGGAACAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTACGTGGAGGAGCTTGAAGAGAAAGTTAGATCATTGAATTCCATCATTGCTGATATGAGTAGTAAGATGTCGTATATGGTGGCTGAGATTGCTACTCTTAGACAGCAAGTGGGTGCTGCTGCTGGTGTGATGTGTCCTCCTCCTCCTCCTCCTGCTCCTGGGATGTACCCTCATCATCCTCCAATGGCACCCATGCCTTATCCATGGATGCCATGTGCTCCTTATGTTGTTAAGCCTCAAGGGTCTCAGGTTCCTTTGGTTCCCATTCCTAGGTTGAAGCCTCAGCAACCTGCTTCAGCCCCCAAGAGTAAAAAGAGTGAGAGTAAGAAGAGTGAGGGGAAAACTAAGAAGGTTGCTAGTATTAGTTTGTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCTGTTGTTGATTTTAGGTTTGGGGGTTTAGTGGACAATGTTCCCGGTACTGGTAGTTCTAATTATGTTAGTGATAGGGTGTATGGTCATGGTGGAGGGAAGGTTTGGTCTTTGAATGGTCCTAGGAATGGGTCTGGAAGAGATGGGGATGTAGGATTTTCTAATGGGAGGTTTAGTGTTTCTGACAGAGTGAAGAATTATGAGAAGAGAGGCCGGAATTTAAGAGAAGAAAGGCATGATCGGAAAGGCCCAGATGATTCCAGTCGTCAGGGCAATGCTAGTGAGCCCCTTGTTGCTTCTCTGTATGTTCCTAGGAATGATAAGATGGTGAAGATTGATGGGAACTTGATTATCCATTCCATTATGGCCAGTGAGAAAGCCATGGCATCTCAAACTGCTGAGGCAAAGAAGGACAAGAGGGAAACTGGGTTGGCCATTCCTAAGGATTTGGATTCTGCATTGGCTATTCCTGGAGTTGGAAGAAGCAGAGATCAACATCCACATGTGTATAGGGTTTCTCCTGAACAGAGGAAGGCTCTTGGCTCTGGTTCAACCAAAGCTTTGAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGTCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGCTTCTCCAAGTCCTGGAGCAATAGTTCCTGCAACATCAGTAGCCAATGTTTCCACCGAAAACCATCAGAATGCTACCAGTGTTAAGAAGACCAGGAATAGAAGAACCCTTCATGAGCTCCCAGAGCCGCTTAATGGGTCTAGTCTGAACATAACTGAAGAACAAGTGAAAAATTTGCAGAAAGACCACTTCCATGGTAACAAGTCTTCTATGGTGGTTTCAGTCCTTGTTGATCCCAGAGAGGCTGGTGATGGTGATGTTGATGTTGATGGCATGATGAGGCCAAAGTCACTCTCTCGGATTTTTGTGGTTGTGCTAATTGATAGTGTCAAGTATGTCACTTACTCGTGTGGTCTGCCTCGTGCTTCTCCTCATTTAGTGACTGGTTATGTATGA 2439 0.4793 MYRVLAREPRALLQITNETPKIPKTHFFSSISQKPSRMTESMPAVEPSPEPPASDIVFDDFSTDFSAFPIPSMDSLFNTTDGLPFPSDLEFGMDFNNNNGEFEITFDDLDDIYIPSDAEDFLLPDACNPNYASVSPPIDDSSAKNSDSDASAVSGDGVSRFFNSQVSESDSADNVRVPSVPSPEAEFCEREESSNGPVSSQGSGNGGSGVYEAMHSPSPDSGPYERDITSFHAHAATNNGVKMEEVPAFDLKRKKGSCEGSATKHRRFSSSVENNNNNKTEKQFQSDLNGIEDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSLNSIIADMSSKMSYMVAEIATLRQQVGAAAGVMCPPPPPPAPGMYPHHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPASAPKSKKSESKKSEGKTKKVASISLLGLFFFIMLFGGLVPVVDFRFGGLVDNVPGTGSSNYVSDRVYGHGGGKVWSLNGPRNGSGRDGDVGFSNGRFSVSDRVKNYEKRGRNLREERHDRKGPDDSSRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTAEAKKDKRETGLAIPKDLDSALAIPGVGRSRDQHPHVYRVSPEQRKALGSGSTKALKDHMKSSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDASPSPGAIVPATSVANVSTENHQNATSVKKTRNRRTLHELPEPLNGSSLNITEEQVKNLQKDHFHGNKSSMVVSVLVDPREAGDGDVDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHLVTGYV* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1061 812 MobiDBLite consensus disorder prediction 260 280 - -
Gso3g1061 812 MobiDBLite consensus disorder prediction 134 176 - -
Gso3g1061 812 SMART brlzneu 293 357 IPR004827 GO:0003700|GO:0006355
Gso3g1061 812 MobiDBLite consensus disorder prediction 519 543 - -
Gso3g1061 812 MobiDBLite consensus disorder prediction 263 280 - -
Gso3g1061 812 MobiDBLite consensus disorder prediction 133 226 - -
Gso3g1061 812 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 50 809 - -
Gso3g1061 812 Gene3D - 295 358 - -
Gso3g1061 812 CDD bZIP_HY5-like 298 347 - -
Gso3g1061 812 MobiDBLite consensus disorder prediction 519 554 - -
Gso3g1061 812 Pfam bZIP transcription factor 296 355 IPR004827 GO:0003700|GO:0006355
Gso3g1061 812 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 295 358 IPR004827 GO:0003700|GO:0006355
Gso3g1061 812 MobiDBLite consensus disorder prediction 404 433 - -
Gso3g1061 812 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 50 809 - -
Gso3g1061 812 MobiDBLite consensus disorder prediction 193 207 - -
Gso3g1061 812 SUPERFAMILY Leucine zipper domain 297 355 IPR046347 GO:0003700|GO:0006355
Gso3g1061 812 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1061 Gso-Chr3 35519439 35522861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1061 63 809 bZIP Transcription Factor Family AT2G40950 48.026 2.47e-169 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso3g1061 bZIP_1 4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1061 K25783 - gmx:100101871 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1061 3 35519439 35522861 Gso3g1061 3 35519439 35522861 ECH
Gso19g1065 19 38453330 38456707 Gso3g1061 3 35519439 35522861 GST