Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1054 ATGGAGCTTCTTTCCTTCCTCTTCCTCTCCCTTCTCTTCTTCCTCTATCTCTACATCCAGTTCCTCGCTAGAAAAAAACCCCGCAACAACAAAGCCTTCAAAGACTACCCTCTCATCGGAACCCTACCGGAGTTCCTCAAAAACCGCCACCGTTTCCTCGAGTGGACCACCCAAGTCCTCCGCGACTCCCCCACCAACACCGGCGTCTTCTCTCGCCCCTACAAACTCCACGGCATCTTAACGGCCAACCCTGACAACGTGGAACACGTGCTCAAAACCAAATTCGACAACTACCCCAAGGGAGAACGCTTCATCCACCTCCTCCAAGATTTTTTGGGTAACGGAATCTTCAACTCCGACGGCGACCTCTGGAAGGTGCAGCGTAAAACAGCCAGCTACGAGTTCAGCACCAAATCGCTCCGAAACTTCGTCGTCGACGCCGTCACCTTCGAACTCCAAACGAGGCTTCTTCCAATTCTCTCCAAAGCCTCTGAAACAAACAAGGTTCTCGATTTGCAGGACTTGTTGGAGCGCTTCGCCTTCGATAACGTGTGCAAGCTAGCGTTCAATGTGGACCCCGCTTGTCTCGGCGGCGACGGCACAGCTGGCGGCGAGTTCATGCGCGCCTTCGAGGACGCCGCGGTTCTGAGCTCAGGGAGGTTCATGAGCATTTTACCGGTTGTGTGGAAAATAAAGAAGCTGTTCAACTTTGGATCAGAACGGAGGCTCAGAGAATCAATCACCACCGTTCACCAATTTGCTGATTCAATCATACGGTCCAGATTGGAATCCAAGGACCAAATCGGAGATGAAGATTTACTATCACGTTTCATCAGAACAGAGAATACCTCACCGGAGTTTCTGCGCGACGTTGTGATAAGTTTTATTCTGGCGGGGCGTGATACGACGTCGTCTGCTCTGAGCTGGTTTTTCTGGATTCTGTCCTCCAGACCCGACGTGCAAAGAAAAATTCGGGACGAAATCGAAACGGTTAGATCGGAAAAATCAAAGGGCGCGTTTGGATACGAGGAGGTGAAGGAGATGCGCTACCTGCAAGCGGCGATTTCGGAGACGATGAGGTTGTACCCGCCAGTGCCGGTTGACACGATGGAGTGCCTAAACGACGACGTATTGCCGGACGGAACTAGGGTTGGGAAGGGGTGGTTCGTGACGTACCACACGTACGCGATGGGGAGGATGGAGAGCGTGTGGGGGAAGGACTGTACCGAATTTAAGCCCGAAAGGTGGTTGGAGAATCGAGCCGAGAGTCCGTTTCGGTATCCGGTGTTTCACGCGGGTCCACGAATGTGTCTGGGGAAGGAAATGGCTTATATTCAGATGAAGTCAATTGCAGCTTCGTTATTGGAGAGGTTTGAGATTGAGGCTTTGGATAAGGACACGTGTCCGGAGCATGTTTTGTCTTTGACGATGAGGATCAAAGGAGGGTTGCCTGTGAGTGTAAGAGTAAGGAATGAATGA 1479 0.5179 MELLSFLFLSLLFFLYLYIQFLARKKPRNNKAFKDYPLIGTLPEFLKNRHRFLEWTTQVLRDSPTNTGVFSRPYKLHGILTANPDNVEHVLKTKFDNYPKGERFIHLLQDFLGNGIFNSDGDLWKVQRKTASYEFSTKSLRNFVVDAVTFELQTRLLPILSKASETNKVLDLQDLLERFAFDNVCKLAFNVDPACLGGDGTAGGEFMRAFEDAAVLSSGRFMSILPVVWKIKKLFNFGSERRLRESITTVHQFADSIIRSRLESKDQIGDEDLLSRFIRTENTSPEFLRDVVISFILAGRDTTSSALSWFFWILSSRPDVQRKIRDEIETVRSEKSKGAFGYEEVKEMRYLQAAISETMRLYPPVPVDTMECLNDDVLPDGTRVGKGWFVTYHTYAMGRMESVWGKDCTEFKPERWLENRAESPFRYPVFHAGPRMCLGKEMAYIQMKSIAASLLERFEIEALDKDTCPEHVLSLTMRIKGGLPVSVRVRNE* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1054 492 Pfam Cytochrome P450 80 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PANTHER CYTOCHROME P450 94B3-LIKE 20 487 - -
Gso3g1054 492 SUPERFAMILY Cytochrome P450 24 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 Gene3D Cytochrome P450 13 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1054 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Gso3g1054 492 PANTHER CYTOCHROME P450 20 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1054 Gso-Chr3 35443505 35445589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1054 6 491 Cytochrome P450 AT3G56630 58.954 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1054 - - gmx:100812147 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1054 3 35443505 35445589 Gso3g1054 3 35443505 35445589 ECH