Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1053 ATGGAAGGAGATGGGTATTGTGGGAGTTTCTTTCAGAGGTGCAAGCCTTACATAGCCATGATTTCTCTGCAATTCGGGTTTGCGGGTATGAACATAATCACCAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACACGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTATTGTTCTAGAGAGGAAAGTGAGGCCCAAGATTACATTTCTCATGTTCATGCAAATATTCGTGTTGGGTCTCCTTGGGCCTGTGATTGATCAGAACTTATATTATGCGGGGTTGAAATTTACTTCCCCTACCTACTCATGTGCGATAAGCAACATGCTCCCTGCTATGACATTTGTGATGGCTGCTATTTTCAGGATGGAGAAGTTAAACGTGAGAAAAGTAAGATGCCAAGCAAAGGTGATTGGAACTGTAGTAACAGTTGCTGGGGCCATGTTGATGACATTGTACAAAGGGCAAGTAATCAGTTTCTTGGGGTCTAAGTACATGCATCACCCAAGAAACTATGTACCTGAAAACAACACTGATTCTGGTGAAAAGGATTGGTTCAAGGGTTCTGTTCTTCTCGTACTTGCCACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGGCAGTGACATTAAGGAAATACCCTGCTCAGCTCTCCCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAATCAATTGCAGTTACCTTTGTCATGGAGCACAAACCATCTGTTTGGACCATTGGCTGGGACATGAACCTTCTTGCTGCAGCCTATGCTGGAATAATATCATCAGGTATCACCTACTATGTTCAAGGGATTGTCATGCAGAAAAAAGGGCCTGTTTTCGTTACTGCTTTCAGCCCTTTGATGATGATTATCGTAGCCATCATGGGTACCTTCATCCTTGCAGAAAAAATATATCTTGGAGGGGTCATTGGAGCTATTCTCATAGTAATGGGACTTTACTCGGTTCTGTGGGGCAAGCACAAGGAGAACAAAGAGAAAGAGGCAGAGATAACCATTGAGGTATTGAAGTGTTGTTCAGAAAATGGGATGAGGTTGGAGACTGTGGTAGAAGATGCTGAAACAAACAACGACATTGAGATGCAAAAGGGTGAAGCCTCAAGAGAGTTAAGGGTAGCCATTGGAGTTCCAAAAGTTTAA 1182 0.4374 MEGDGYCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKLNVRKVRCQAKVIGTVVTVAGAMLMTLYKGQVISFLGSKYMHHPRNYVPENNTDSGEKDWFKGSVLLVLATLSWASFFILQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKPSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKIYLGGVIGAILIVMGLYSVLWGKHKENKEKEAEITIEVLKCCSENGMRLETVVEDAETNNDIEMQKGEASRELRVAIGVPKV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1053 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 337 - -
Gso3g1053 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Gso3g1053 393 PANTHER WAT1-RELATED PROTEIN 10 365 - -
Gso3g1053 393 PANTHER WAT1-RELATED PROTEIN 10 365 IPR030184 GO:0016021|GO:0022857
Gso3g1053 393 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Gso3g1053 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1053 Gso-Chr3 35407650 35410236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1053 1 391 Nodulin-like Gene Family AT5G07050 62.374 6.89e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1053 - - gmx:100811617 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1053 3 35407650 35410236 Gso3g1053 3 35407650 35410236 ECH
Gso19g1061 19 38377396 38379959 Gso3g1053 3 35407650 35410236 GST