Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1051 ATGGCTCTGCTTCTGATAGTACCCATTTCACTGGTAACCCTCTGGCTCGGTTACACCCTATACCAGCGGCTACGCTTCAAGCTCCCTCCTGGCCCACGGCCCTGGCCGGTAGTCGGTAACCTCTACGACATAAAACCCGTCCGGTTCCGGTGCTTCGCTGAGTGGGCGCAGTCTTACGGCCCTATCATATCGGTCTGGTTCGGTTCGACCCTAAACGTCATCGTTTCAAACTCGGAGTTGGCCAAGGAGGTTCTGAAGGAGCACGATCAGCAGCTGGCGGACCGGCACCGGAGCCGGTCGGCGGCGAAGTTCAGCCGCGACGGGAAGGATCTCATTTGGGCCGATTATGGGCCGCACTACGTGAAGGTGAGGAAGGTTTGCACGCTCGAGCTTTTCACGCCGAAGCGCCTCGAGTCCCTCAGGCCCATTAGGGAGGACGAGGTCACCACCATGGTTGAGTCCGTTTACAATCACTGCACCACCACTGGAAATTTAGGGAAAGCAATATTGGTGAGGAAGCACTTGGGGTCTGTGGCATTCAACAACATCACCAGGTTGGCATTTGGAAAAAGATTTGTGAACTCAGAAGGTGTTATGGATGAGCAAGGAGTAGAATTCAAGGCCATTGTGGAAAATGGGTTAAAGCTAGGAGCATCTCTAGCCATGGCAGAACACATCCCTTGGCTGCGCTGGATGTTCCCACTGGAAGAAGGAGCTTTTGCCAAGCATGGAGCCCGCCGCGACCGACTCACCAGAGCCATCATGACGGAGCACACTGAAGCACGCAAGAAATCTGGTGGTGCCAAGCAACATTTTGTTGATGCCCTCCTCACATTGCAAGACAAGTATGACCTTAGTGAAGACACCATCATTGGTCTCCTTTGGGATATGATCACAGCAGGGATGGACACAACTGCAATTTCAGTTGAGTGGGCCATGGCTGAATTGATAAGAAACCCAAGGGTGCAACAAAAGGTCCAAGAAGAGCTAGACAGGGTAATTGGGCTTGAAAGGGTGATGACTGAAGCTGACTTCTCAAGCCTGCCTTATCTACAATGTGTGATCAAGGAAGCAATGAGGCTTCACCCACCAACCCCACTAATGCTCCCACACCGTGCCAATGCCAATGTCAAAGTTGGAGGCTATGATATTCCAAAAGGGTCCAATGTGCATGTGAATGTGTGGGCCGTGGCCCGTGACCCGGCAGTGTGGAAGGATCCGTTGGAGTTCCGACCCGAGAGGTTCCTTGAGGAGGATGTGGACATGAAGGGCCATGACTTTAGGCTACTTCCATTCGGGGCGGGTCGCCGGGTATGCCCGGGTGCCCAACTTGGTATCAACTTGGTAACATCCATGTTGGGCCACCTCTTGCACCATTTTTGTTGGACCCCACCTGAAGGAATGAAGCCTGAGGAAATTGACATGGGAGAGAATCCAGGGTTAGTCACATACATGAGGACTCCAATACAAGCTTTGGCTTCTCCTAGGCTCCCCTCACATTTGTACAAACGTGTGCCTGCTGAGATCTAA 1530 0.5275 MALLLIVPISLVTLWLGYTLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTTMVESVYNHCTTTGNLGKAILVRKHLGSVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLRWMFPLEEGAFAKHGARRDRLTRAIMTEHTEARKKSGGAKQHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSSLPYLQCVIKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQALASPRLPSHLYKRVPAEI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1051 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 502 - -
Gso3g1051 509 Pfam Cytochrome P450 29 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Gso3g1051 509 PANTHER CYTOCHROME P450 98A3 4 502 - -
Gso3g1051 509 SUPERFAMILY Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1051 509 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1051 Gso-Chr3 35384390 35389007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1051 5 509 Monolignol Biosynthesis Gene Families AT2G40890 80.594 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1051 K09754 - gmx:100811080 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1051 3 35384390 35389007 Gso3g1051 3 35384390 35389007 ECH
Gso19g1060 19 38335500 38340603 Gso3g1051 3 35384390 35389007 GST