Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1033 ATGGAACACCATTTTGGTCAAGGCACTGCAGAACCTGCATCTGAATCCTTTGATAAGGCTAGGGTTTTAAATGTGAAGCCATTAAGAACTCTTGTTCCTGTGTTCCCTTCACCATCTAATCCTGCTTCATCTTCAACTCCACAAGGTGGTGCCCCTTTTGTGTGTGTTTCTCCTTCTGGCCCTTTCCCTTCAGGGGTTGCACCCTTCTATCCTTTCTTCATCTCCCCAGAATCCCAGAGGCTCTCTGAACAGAATGCGCAAACCCCGACCAGTCAACGCGTGGCTGCGGGTCCAATATCTACTGCAGTTCCAATTAATTCATTTAGGACACCAACTGGGGCTGCTAATGGAGATGTGGGCTCGTCACGAAAGAATGCCAGAAGTCGTGGACAGATCACAGACGAAGATGGCCACAGTAATGTTGAGATAGAAGAAATTGATGCAGACAAAGGAACTGGGACTGGGAGGTTAAAGCGCAAGTCGAATAAGAAGACAAAGGCACGACATATTGGTGGTTCTGTTTCTGTTGATGTTGATCCGGATGCAGTTGCCGCTGATATTCTCAAATCACTCAACCCAATGGTTTTTGATGTACTTAATCAACCAGAAGGTAGCAGGGACTCAGTTGCGTATACACTCATGACATATGAAGTGATGCGAAGAAAGCTTGGACAAATTGAAGATTCAAATAAGGCAGCTAACTCTGGAGCAAAACGGCCTGATTTGAAGGCAGGTGCACTTATGATGAGTAAAGGGATTCGGACCAACAGCAAGAAACGTATTGGAGGTGTGCCTGGTGTTGAGATTGGGGATATTTTCTTTTTCAGATTTGAATTGTGCTTAGTGGGCTTACATGCTCCTTCTATGGCTGGAATTGACTACATTGGTACCAAAACCAGTCAAGAAGAAGAGCCCTTAGCTGTAAGTATCGTCTCATCTGGAGGGTATGAAGATAATGTGGATGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGTGAACCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCGTTGGAGAAGAGTGCGCATAGAGGTAATGAAGTGAGAGTAATTAGGGGTTTGAGGGATCCACAACATCCAACTGGGAAGATTTACGTCTATGATGGCCTTTACAAGATTCAAAATTCCTGGGTGGAGAAAGCAAAATCTGGTTTCAATGTATTCAAGTATAAATTAGTCAGGTTGCCTGAACAGCCTCAAGCATATATGATTTGGAAATCCATTCAACAATGGACTGAGAAATCTGCTTCAAGAGCTGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAATGTACCTGTTTGTCTTGTGAATGATGTTGATAACGAGAAGGGCCCTGCATATTTCACTTACATCCCAACTCTCAAGAATTTGAGGCCAACTGCTCCTGTGGAATCTTCTACTGGATGCCCTTGTGTTGGTGGATGTCAATCTAAAAATTTTAACTGCCCTTGCATTCAAAAGAATGGAGGCTATCTTCCATATTCTTCAGCTTTGCTACTTGCGGACCTAAAATCTGTGATATATGAGTGTGGCCCTTCTTGTCAATGTCCTTCTAATTGCCGAAATCGGGTTTCTCAAAGTGGCTTGAAATTTCGTTTGGAGGTTTTCAGAACCAAGAATAAAGGTTGGGGTCTTAGATCATGGGATTCTATTCGTGCAGGAACTTTCATATGTGAGTATGCAGGGGAAGTCATAGATAGTGCTAGAGTGGAGGAGCTTGGTGGTGACAATGAAGATGATTACATTTTTGATTCTACTCGCATTTATCAGCAACTGGAAGTTTTTCCTGGTGATACTGAAGCTCCGAAAATCCCATCCCCCCTTTATATATCAGCAAAAAATGAAGGAAATGTTTCTCGGTTTATGAACCACAGCTGCTCTCCAAATGTATTATGGCGTCCAGTCATACGTGAAAATAAGAACGAGTCAGATCTCCACATTGCTTTCTATGCAATTAGACATATCCCTCCTATGATGGAGTTGACTTATGATTATGGGACTGTTCTTCCTCTCAAAGTAGGTCAGAGGAAAAAGAAATGCTTATGTGGATCTGTGAAATGCAAAGGTTACTTTTGTTAA 2127 0.4311 MEHHFGQGTAEPASESFDKARVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTSQRVAAGPISTAVPINSFRTPTGAANGDVGSSRKNARSRGQITDEDGHSNVEIEEIDADKGTGTGRLKRKSNKKTKARHIGGSVSVDVDPDAVAADILKSLNPMVFDVLNQPEGSRDSVAYTLMTYEVMRRKLGQIEDSNKAANSGAKRPDLKAGALMMSKGIRTNSKKRIGGVPGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVDDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSAHRGNEVRVIRGLRDPQHPTGKIYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPEQPQAYMIWKSIQQWTEKSASRAGVILPDLTSGAENVPVCLVNDVDNEKGPAYFTYIPTLKNLRPTAPVESSTGCPCVGGCQSKNFNCPCIQKNGGYLPYSSALLLADLKSVIYECGPSCQCPSNCRNRVSQSGLKFRLEVFRTKNKGWGLRSWDSIRAGTFICEYAGEVIDSARVEELGGDNEDDYIFDSTRIYQQLEVFPGDTEAPKIPSPLYISAKNEGNVSRFMNHSCSPNVLWRPVIRENKNESDLHIAFYAIRHIPPMMELTYDYGTVLPLKVGQRKKKCLCGSVKCKGYFC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1033 708 MobiDBLite consensus disorder prediction 128 156 - -
Gso3g1033 708 Pfam SET domain 558 682 IPR001214 GO:0005515
Gso3g1033 708 ProSiteProfiles SET domain profile. 547 682 IPR001214 GO:0005515
Gso3g1033 708 SMART preset_2 437 531 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso3g1033 708 Pfam Pre-SET motif 441 539 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso3g1033 708 SMART set_7 547 688 IPR001214 GO:0005515
Gso3g1033 708 SUPERFAMILY PUA domain-like 244 427 IPR015947 -
Gso3g1033 708 MobiDBLite consensus disorder prediction 80 127 - -
Gso3g1033 708 ProSiteProfiles Post-SET domain profile. 692 708 IPR003616 -
Gso3g1033 708 SMART G9a_1 257 412 IPR003105 -
Gso3g1033 708 ProSiteProfiles Pre-SET domain profile. 483 544 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso3g1033 708 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 13 707 - -
Gso3g1033 708 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 13 707 - -
Gso3g1033 708 Gene3D - 245 429 IPR036987 -
Gso3g1033 708 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 110 707 IPR025794 GO:0016571
Gso3g1033 708 Pfam SAD/SRA domain 261 412 IPR003105 -
Gso3g1033 708 Gene3D SET domain 430 707 IPR046341 -
Gso3g1033 708 SUPERFAMILY SET domain 423 688 IPR046341 -
Gso3g1033 708 MobiDBLite consensus disorder prediction 80 169 - -
Gso3g1033 708 ProSiteProfiles YDG domain profile. 262 408 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1033 Gso-Chr3 35029496 35034221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1033 12 707 Su(var)3-9 homologs AT1G73100 48.133 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso3g1033 SAD_SRA 4e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1033 K24405 - gmx:100805932 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1033 3 35029496 35034221 Gso3g1033 3 35029496 35034221 ECH