Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1026 ATGGGACGAGCCAGGCTTCTGGTTTCAGACTTCGTTCTGTCTTTCATGTGGGTATGGTCCGGTGTTCTTCTTCGGATCCTCGTCTTCAAACACCTCGGCTTCGCTCATGGACCCCTCGGTGAGGTTATCAAAACCACCTTCTCCGTCGCCAACATGTTCTTCTTCGCCTTCCTCGTCAAGGTTACACGTGGCGCCGCCTACAACCCCCTCACCGTTCTGGCCGATGCTATCACCGGGGATTTTAACACCTTCCTCTACTGCGTTGGCGCCAGAATCCCCGCTCAGGTGGTTGGATCGATTGTTGGAGTTAAACTTCTTATTGATACCATTCCTGAAGTAGGAGTGGGACCACGCCTGAACGTTGACATTCATCAGGGTTCGCTGACAGAAGGATTACTAACATTTGCAATTGTAACCATTTCACTTGGACTCGCCACGAAAATTCGTGAAAATTTCTTCATGAAGACTTGGATCTCCAGCCTCTCCAAGTTAACACTTCACATACTTGGCTCTGATCTGACTGGTGGTTGCATGAACCCTGCATCTGTAATGGGATGGGCTTATGCTCGAGGGGATCACATAACAAAGGAGCACTTTCTTGTGTATTGGCTTGCTCCCATAGAAGCAACTATTTTTGCAGTGTGGACATCCAAATTTCTAGTGCAGCCTGGAAAAGAACATAAAAAAGCCTGA 693 0.4834 MGRARLLVSDFVLSFMWVWSGVLLRILVFKHLGFAHGPLGEVIKTTFSVANMFFFAFLVKVTRGAAYNPLTVLADAITGDFNTFLYCVGARIPAQVVGSIVGVKLLIDTIPEVGVGPRLNVDIHQGSLTEGLLTFAIVTISLGLATKIRENFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHFLVYWLAPIEATIFAVWTSKFLVQPGKEHKKA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1026 230 PANTHER AQUAPORIN SIP2-1-RELATED 1 229 - -
Gso3g1026 230 PANTHER AQUAPORIN SIP2-1-RELATED 1 229 IPR044226 GO:0015267
Gso3g1026 230 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso3g1026 230 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso3g1026 230 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso3g1026 230 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso3g1026 230 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso3g1026 230 SUPERFAMILY Aquaporin-like 4 226 IPR023271 -
Gso3g1026 230 Pfam Major intrinsic protein 5 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso3g1026 230 Gene3D Glycerol uptake facilitator protein. 3 230 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1026 Gso-Chr3 34949763 34952770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1026 1 229 Major Intrinsic Protein MIP AT3G56950 59.565 2.38e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1026 K09875 - gmx:100804324 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1026 3 34949763 34952770 Gso3g1026 3 34949763 34952770 ECH