Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1007 ATGGGATGGTTAAAGTCCTACCTGCCAGTAATGGCCATGTTGTTTAATCAGTCCATTTATGCAGGAATTAGTCTCAGCACAAGAGTTGCTTTCTTACAAGGAATGAGCCCAAGGGTGTTTGTAGTGTATCGTCATGCTTTTGCAACCATTGTGATTGCTCCAATAGCTTATTTCTCAGGGAGAAATTCTGGCTCCTATTACTTAAATTTAAAGAGTTTTTCCTGGATATTCTTGACCTCATTAATTGGGATCACGTTGAATCAAAATTTATTTTTTGAGGGTCTATATCTGGCCTCTTCTTCAGTCGCAAGTGCAATGGCAAATCTTGTTCCAGCTGTAACATTTATAATAGCAGCTTGTGCAGGAATGGAGAAAGTGAATATTCGAAGCACGAGATCTTTAGCCAAGATAATAGGAACAGTTATATGTGTGAGTGGGGCAGTTTCCATGGCTTTGTTGAAGGGTCCAAAGCTACTAAATGCTGAAATTCTGCCATCAAAATCCATCATGGCCTCAGGAGGCGATCATTGGTTACTGGGTTGTCTATTTCTCACTGGATGCTGTTGTGCTTGGTCAGTCTGGCTCATTTTGATGGTTCCAGCCTCTACAAGCCACCCTGATCACTTATCCTTCTCAGCGTGGATGTGTTTCATGGCAACATTACAATCAACATTAGTGACACTATTGCTCGAGCCAGACCCACATGCATGGAAGATTAATTCTCTACTTGAATTTGGTTGCACCTTATATTCAGGAGTTATAGGATCTGCAGTATTATTATTTATCCAAGCATGGTGCATTTCGCTAAGAGGTCCTCTCTTCTGTGCAATGTTCAATCCTCTTTTCACAGTCATTGTGACTATATTGGCTGCTTTATTACTTCACGAGGAGATATACTCTGGAAGCTTGATAGGCTCAACTGGAGTGATCATTGGCTTATATGTGGTGCATTGGGGTAAAGCTGAAAAAGTTTCTGAGGTGAATGTGAAATTGACCGATCCAAAATCGATGGTTAATTCAACAGAGGATGTGAAAATATTGATTAACGGTTCTTCTTCTGTAAAAGCATGTTGTAAAACCAATAATTTAGAAGAACCCCTTCTATCTGCTGATTCTCCTTCACATCGTTAA 1131 0.4014 MGWLKSYLPVMAMLFNQSIYAGISLSTRVAFLQGMSPRVFVVYRHAFATIVIAPIAYFSGRNSGSYYLNLKSFSWIFLTSLIGITLNQNLFFEGLYLASSSVASAMANLVPAVTFIIAACAGMEKVNIRSTRSLAKIIGTVICVSGAVSMALLKGPKLLNAEILPSKSIMASGGDHWLLGCLFLTGCCCAWSVWLILMVPASTSHPDHLSFSAWMCFMATLQSTLVTLLLEPDPHAWKINSLLEFGCTLYSGVIGSAVLLFIQAWCISLRGPLFCAMFNPLFTVIVTILAALLLHEEIYSGSLIGSTGVIIGLYVVHWGKAEKVSEVNVKLTDPKSMVNSTEDVKILINGSSSVKACCKTNNLEEPLLSADSPSHR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1007 376 Pfam EamA-like transporter family 19 148 IPR000620 GO:0016020|GO:0016021
Gso3g1007 376 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020|GO:0016021
Gso3g1007 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 320 - -
Gso3g1007 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Gso3g1007 376 PANTHER WAT1-RELATED PROTEIN 13 351 IPR030184 GO:0016021|GO:0022857
Gso3g1007 376 PANTHER WAT1-RELATED PROTEIN 13 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1007 Gso-Chr3 34509340 34512617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1007 1 376 Nodulin-like Gene Family AT4G30420 52.618 1.00e-131 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1007 - - gmx:100812331 744.191