Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0987 ATGTCCCTCCTCCGCCATGTTTGCACAACCTCAAAGCTCTCAGCAGCAGCAGCAGCAGCAGCATCAGCAGCATCAACAGCAACGATGGCGATCCCTTGGAAGTACAAGAAGTTCGCCATATCACAGGGTCAGAAGTCCCTCACCGACTACCTCCACGCCACGCGCAGCATCCCTTACGCCTACGCCAACCAAATCGCCAAGAACTCCCTCACTTCCCTCACCACCCTCATCACCACTCTCGGCACTTCTTCCTTCTCCCCTCTCCACTTCCCCCACAACCTCAACAAGTTCCTCATGTACCACCCCATCAACGAATTCGAGTTCTTCTTCGAGAGCATTGGCATTCACCCCTCCAACTTCCATTCTCTTTTGCCCCAAGACAAGTTCTTTTTCTCCCAAGATGATACCCTTTTGAGTGCTGCTTGTGTTCTTTACGAGTTTGGGTTTCCCTGGGATAGGCTTGGGGTTTTGTATGTGGAGAGTGGCTGTTTTCTCAATTGGGGTGCTTCTGAGTTGAAGGATAGGGTTTGTGGGTTCAAAAGGTATGGTCTTTGCAATGAGCAGGTTGTTGGGGTGTGTATGGCTTTTCCCTTTGTGTTTGATGGCCAAAAGGGTGATGATGAGGTTGAGGCTTTGTTTCGTGATCTGGGGTTGCTGTTTGGGGAGTTTGGTTTGGCTGAGTGTGTTGAGGGGAAGGGGAACTATAGTGTCGATGATTGGATTCGGGTGTGTAGGAAGATAAGGTTGTTTTATGATTTGAATGGTGGGAAGAGCTTAGTGGAGCTCATTGGAAGGAACAATGGTGGTGGTGTTGGTGTCATTGTGGAGCATGGGGAAGAGGAGTTGGTTCAAGCAGCTGAGTATTTTTGTAGGTTTGGTGCGAAGAAGGAGGATGTGGCACGATTGATTGTAGACGGACCGGAGTTGTTGGAGCTTGATTTGGAGGCATGGGTGGTTGATGTGGTGAAGCTGTTGAAGTACTTTGGAATGAGATCGGATGATGTCGAGGATGTTAGGAGGGATTATGCTCATGTATTGGGGACAGTTAAGATGGGTAATCTGCCCAATGTGATGAGAGCGTTAGGTTTACGTGAGTGGTTCTTTGATAAGATCAACGATGGGAATCATCAATTGTTAGTTAGTTTTGTCACGAGCTGTCCCGGTGAATTCCAAGATGAAGGCTATCTAGGTCGTTTGAAGGCGATTCAGGCATCAAGAACCCCAACTCACAACATTAGCAAGTTGAATTTCTTGCACGCCATTGGCTTTGGCGAAAATGCTTTGACCATGAATGTGTATGCTCAGATGCATGGAACAAGTGGCAAATTACAAAAGAGATTTAATTGCCTTCTACGTCTTGGGATTGAATTTTCGAAGATCTGTAAGATGATCACAATTCATCCTAAGATTCTTAGCCAAAACCCTCAAAATTTAGAGCAAAAGGTTAATTTCTTTTGTCAGGAAATGGGATATTCACTGGAGCATTTGATCACTTTTCCAGCATTCTTGTGCTTTGACTTAGAGAACCGCATTAAGCCTAGGTACAGGTTCCATATGTGGATTATGGAAAAGGGTCTGTCTTCCAAAAATTATTCCATTACAAGCATGGTTGCAACAAGCGACAAGAATTTTGTTGCTCGCGCTCTTAAAATTCACCCAGCTGCTCTAAAACATTGGTTTGAGCAATTCTATCTAAGAAATTTGCCAGTGCGATGA 1716 0.4569 MSLLRHVCTTSKLSAAAAAAASAASTATMAIPWKYKKFAISQGQKSLTDYLHATRSIPYAYANQIAKNSLTSLTTLITTLGTSSFSPLHFPHNLNKFLMYHPINEFEFFFESIGIHPSNFHSLLPQDKFFFSQDDTLLSAACVLYEFGFPWDRLGVLYVESGCFLNWGASELKDRVCGFKRYGLCNEQVVGVCMAFPFVFDGQKGDDEVEALFRDLGLLFGEFGLAECVEGKGNYSVDDWIRVCRKIRLFYDLNGGKSLVELIGRNNGGGVGVIVEHGEEELVQAAEYFCRFGAKKEDVARLIVDGPELLELDLEAWVVDVVKLLKYFGMRSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGLREWFFDKINDGNHQLLVSFVTSCPGEFQDEGYLGRLKAIQASRTPTHNISKLNFLHAIGFGENALTMNVYAQMHGTSGKLQKRFNCLLRLGIEFSKICKMITIHPKILSQNPQNLEQKVNFFCQEMGYSLEHLITFPAFLCFDLENRIKPRYRFHMWIMEKGLSSKNYSITSMVATSDKNFVARALKIHPAALKHWFEQFYLRNLPVR* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0987 571 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 25 564 - -
Gso3g0987 571 PANTHER CGI-12 PROTEIN-RELATED 25 564 IPR003690 GO:0003690|GO:0006355
Gso3g0987 571 Gene3D Transcription termination factor 3, mitochondrial 67 224 IPR038538 -
Gso3g0987 571 Gene3D Transcription termination factor 3, mitochondrial 277 563 IPR038538 -
Gso3g0987 571 Pfam mTERF 412 544 IPR003690 GO:0003690|GO:0006355
Gso3g0987 571 SMART mt_12 461 492 IPR003690 GO:0003690|GO:0006355
Gso3g0987 571 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Gso3g0987 571 SMART mt_12 427 456 IPR003690 GO:0003690|GO:0006355
Gso3g0987 571 SMART mt_12 494 527 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0987 Gso-Chr3 34077987 34081167 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso3g0987 mTERF 4.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0987 - - gmx:100800581 1098.57