Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso3g0982 | ATGTTGTTGGCGTCTTTTCGTTCGAACTTCCCTTGTGCTGTACAAGGAACTGTATTTTGTCAAAGGAAGCAATTAACTCATGGATGCACAAACCAAAAATCAAAGGATTACATTGTGCAGGATAGGTGCATGTTACAGCATTCGGAGAAAGCATTGAGGAGGACACTTTTCCTTTCTGTCTTGGTCTCAGCTGGTGTTTTTCCAACTTTGTCTTCTTATGGCAAGACAAAGAGTAAGAATCCGTATGATGAAAAACGGTTGCTTCAACAAAATCGGCGGATACAGAAAGAAAACAATGCGCCAGAGGACTTCCCAAATTTTGTTAGAGAAGGTTTTCAAGTTAAAGTAGTATCATCAGATAACTATATAAAGAGTGATTCAGGGCTCATATACCGAGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTTACTTTTCACTATATTGGCTATAATGAATCTGGCCGTCGTATTGACAGCACTTATTTGCAGGGTACTCCAGCCAAAATCCGTATGGGCACCAAGGGATTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCGTACAAAACTGTGAAAGAAGAACCATAGCCTTTTACTCAGATGTCGTATGCAATTGA | 747 | 0.4083 | MLLASFRSNFPCAVQGTVFCQRKQLTHGCTNQKSKDYIVQDRCMLQHSEKALRRTLFLSVLVSAGVFPTLSSYGKTKSKNPYDEKRLLQQNRRIQKENNAPEDFPNFVREGFQVKVVSSDNYIKSDSGLIYRDFVVGQGDCPKDGQQVTFHYIGYNESGRRIDSTYLQGTPAKIRMGTKGLVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTIAFYSDVVCN* | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso3g0982 | 248 | SUPERFAMILY | FKBP-like | 73 | 232 | - | - | |
| Gso3g0982 | 248 | Gene3D | - | 86 | 240 | IPR046357 | GO:0003755 | |
| Gso3g0982 | 248 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC | 7 | 248 | IPR044239 | - | |
| Gso3g0982 | 248 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 142 | 228 | IPR001179 | GO:0003755 | |
| Gso3g0982 | 248 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 145 | 232 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso3g0982 | Gso-Chr3 | 34024921 | 34029667 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso3g0982 | 138 | 234 | Calmodulin-binding Proteins | AT5G48570 | 33.333 | 2.82e-10 | 58.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso3g0982 | - | - | gmx:100305486 | 505.753 |