Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0958 ATGAACCCTCATGCTTTAAACATCAACATGAATACCCTTGATGACATTGAGCTCCCTATAACGACGTCGTTTAACGATGCTTCCGCGTTGGTGCCGCCAACAACGGCAATGTTTGGATGGAACTCCAGCTTTCGGAATGTTTTCTTGGTGGAGAACTGGGCAGAGCTGCCGTTGAAGGAGGATAACGTGGAAGACATGGTTATCTACGGTGTTTTGCATGAGGCTGCCACCACCGGATGGCTCCCCGCTAATGCCAATGGGGTGAGCAACGTAGGGATAACTGTGAAAATGGAAACTAAGAGTCAAAATAGTGACAATTCAATTGCGCGTGGCACTCACGCGCCTCCTAGGAGGGGGTTGAGCTATCGGGGCCTAAGGAGGAGGCTGTGGGAAAAGTATGCAGTAGAGAGATAA 414 0.4976 MNPHALNINMNTLDDIELPITTSFNDASALVPPTTAMFGWNSSFRNVFLVENWAELPLKEDNVEDMVIYGVLHEAATTGWLPANANGVSNVGITVKMETKSQNSDNSIARGTHAPPRRGLSYRGLRRRLWEKYAVER* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0958 137 PANTHER BNAC04G53270D PROTEIN 26 136 - -
Gso3g0958 137 PANTHER DNA-BINDING DOMAIN 26 136 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0958 Gso-Chr3 33629573 33630211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0958 35 136 AP2-EREBP Transcription Factor Family AT2G44840 40.196 2.86e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0958 K09286 K13432 gmx:100804762 192.2