Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0952 ATGGAGAGGGTTGCAGAGCCAAAGGTACTCCCTCGAACCTTGCCTATCCTGGTTGAGGTATCGAACTCACGCACAGCTGCTGCAAGAGAGTCCGGTCAGAGACTAAATCGCCAGGAAGTTTCGGGTGTCGGTGGGATTTCACTGAGAGAAGTGAATCAATTGTCCAGAACAAGGGATGTGCATGTTCCTATTACACATATGGCCTCCATCAGAGAAGTGGCTCAGTTGACGAATGCACGGATATATTTGGTGCAAGAAGATACAGGATTCGATGCTCGATCCTCTGAAGAATCCCTCACCTTTGAGCCTACTATGACATGGAAAGGAAATGGCTCTTCACCAGAAGAAGCTGAAGAATTTGTGCCCGATATTGAGACATTGAAGGGGAGCAGTGATTCATTTGAGGATGGTGGTTCGAGTTTATTTGCTGGTGCTAGTCATCCCCCTGAACCTGTTGATACAGATCTCATGAGAACGGTTTTTGTACCGATAGGTCAAAACAAATCCGAGGCTGGATGCTTAATTAAGAACTTGCCCACAAAGGGCCCTTTCCTGGAGGATCTCTCGATTCGTGTTCCTGCAAAGAAACCAAGTCCAGCTGTTCTTTCCCCTGAAGAAAGTCTGGTTGAAGAACTAAATGGCATAGGGAACTTATCATTTTTAGGTCCTCGAACATTGCAGAGTACTGAGAACTCTCTCCTCCCTCCAGATGCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTCAGTCCACTTAGTAGTATTGATAGTATCGGTGTTGTCACTGCGATGAGCATTGTTAATAGTTGTGCTAGTACGTATCGGAGTGATGCAATGACCAGTGATGGCATGCTTAGTTTAGACAGGAACTGTGACAGTAATAAAGGTAGTGTAAGGGGGGATTCACTAGAGAGTGCTAAAACTAGTGTTAGTCGGCCAAGTGATAGCAGTGGCCTCAGCGATGACAGCAACTGGAGCAACATTACTGGTAGTGCCAATAAACCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGGTTACGGGATGGGATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTAGGATGCGGCGATATTGGAAGTGTCTATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGTACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCGACTTTGTATACACATTTTGAGACTGACCGATTCTCGTGTTTGGTAATGGAATATTGTCCAGGTGGTGATCTGCACACTTTAAGGCAGCGGCAACCTGGGAAACATTTTTCAGAATATGCTGCACGCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTATAGAGACCTCAAACCTGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTCAGATGTGCTGTGTCACCTACTCTTATTAGAACTTCCTATGATGGTGACCCTTCAAAACGGGCAGGTGGTGCATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAATGTGCATCCAACCTGCATGTTTTATTCCCCGGTTATTTCCTCAGAAAAACAAGAAGTCACGGAAGCCAAGAGCTGATCCTGGGTTGCCATCCAGCACACTTCCAGAGCTTGTTGCTGAGCCTACTCAAGCTCGATCTATGTCCTTTGTTGGCACTCATGAGTACCTTGCCCCAGAAATTATCAAGGGTGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTCGGAATTTTCTTGCATGAGCTATTATATGGTAAGACCCCTTTCAAAGGGTCAGGAAATCGCGCTACACTTTTCAATGTAGTTGGTCAGCAACTCAGGTTTCCCGAATCACCGGCGACCAGTTATGCCAGCAGGGATCTGATCCGTGGGTTGCTCGTGAAGGAGCCACAGCATCGTCTTGGGGTTAAAAGGGGAGCAACTGAGATCAAGCAGCATCCCTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACACCGCCAGAAGTGCCGAGACCGATGGAAAATGAAGTACCAGCAGGGAAGGTTGTGGGACCAGTTGATCCTGTTGGGGTTGGCAGCACTAGTAAGAGGATAGCAGGTACTGACAACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2292 0.4638 MERVAEPKVLPRTLPILVEVSNSRTAAARESGQRLNRQEVSGVGGISLREVNQLSRTRDVHVPITHMASIREVAQLTNARIYLVQEDTGFDARSSEESLTFEPTMTWKGNGSSPEEAEEFVPDIETLKGSSDSFEDGGSSLFAGASHPPEPVDTDLMRTVFVPIGQNKSEAGCLIKNLPTKGPFLEDLSIRVPAKKPSPAVLSPEESLVEELNGIGNLSFLGPRTLQSTENSLLPPDAEEKECVWDASLPPSGNVSPLSSIDSIGVVTAMSIVNSCASTYRSDAMTSDGMLSLDRNCDSNKGSVRGDSLESAKTSVSRPSDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRVQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRAGGAFCVQPACIEPSSMCIQPACFIPRLFPQKNKKSRKPRADPGLPSSTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMENEVPAGKVVGPVDPVGVGSTSKRIAGTDNMKSGGKYLDFEFF* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0952 763 SUPERFAMILY Protein kinase-like (PK-like) 348 722 IPR011009 -
Gso3g0952 763 ProSiteProfiles Protein kinase domain profile. 367 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0952 763 Gene3D Transferase(Phosphotransferase) domain 1 595 717 - -
Gso3g0952 763 Pfam Protein kinase domain 597 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0952 763 Pfam Protein kinase domain 368 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0952 763 PANTHER FLIPPASE KINASE 1-RELATED 71 763 - -
Gso3g0952 763 CDD STKc_phototropin_like 365 719 - -
Gso3g0952 763 SMART serkin_6 367 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0952 763 MobiDBLite consensus disorder prediction 291 344 - -
Gso3g0952 763 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 71 763 - -
Gso3g0952 763 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Gso3g0952 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Gso3g0952 763 MobiDBLite consensus disorder prediction 292 340 - -
Gso3g0952 763 Gene3D Transferase(Phosphotransferase) domain 1 451 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0952 Gso-Chr3 33488985 33493522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0952 1 763 AGC Kinase Gene Family AT2G44830 66.031 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso3g0952 Pkinase 8.6e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0971 7 12047691 12052172 Gso3g0952 3 33488985 33493522 GST
Gso3g0952 3 33488985 33493522 Gso18g1806 18 50548285 50553423 PCT
Gso3g0952 3 33488985 33493522 Gso9g1994 9 44385523 44390564 PCT