Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0932 ATGGCAGAGTCCGAATTCGAACCAAACCGAGTCCATGACCTCGAAGAGAAATCGTGGCACCTCCTCGCGCTCCTCTTCCGAATCGGCCACGCCGTTTACCCGCAACGCCTCGCCGCGCAGTGCCGTTTGTTCGCCGCCTCGCCTGACTTCGTCTGCTACGTCAGCACTCTCCCCGGCTCGCCGCTCTCCGTCACCGACAACGGGCTCGTCACGCCCTCCGTCAGCGCCGTCTTCGCCCTCGGAAGCTTCTTCTCCCTCCGCTTCTCGCCGCCGCAGACGCACCGTTTCAGGAAACGCAAGTTGCTTTTCGATTCCGCCGAAGATGGAAGAGAGCGCAAGAGGTTAGCGATTCGTCATGGACTTCGAGAATTTTCGTTCCAGAGTTTTGCTGATGCTGCAGAGGCTCTGATGAGAAGCAATTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGTGGAAATTTTGTATTCCTCTTGCGTATTGATAAAAATGAAGAGTGTTCAGGTTGTCCAATGTCAAATTTTGAACATCGGGGAGCCAATAATGATGCCAGCACAACCATGTCTAATGGAGAGGTTTCTAAATCTATTATCGAAGTGCTGACCAAAAAAATATCCATTATCAAAACAAGTTACTTGAACTGTCCGAAGCTAGTGGACAAAAATAGATTCATGGAATGCAATCTCTTTGTTGTGGATCCCCCATGCAAAGAGGGAATAGTTAACAACCTTGGAATTGGGAAGAAAATAGATTATTTTGACACATTTACGCATGACTGTGCTGAACAAAACAGTATTCATCATGTGGATGAAGATGGTATTGGTAAAAGTAATACTTGCAAAGATCAACCAAGAGAACCAAATGAAGATGATGAGGTGGAAAGTGGTTCAAAGAAAGGGCGGATTGATTCTGGCACAAATAGAGTCAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTGGAGAAGCATTGACTAATGGTTTGGAACAAAAGAACCATGTCCATGCAATGAATTTGGAAAAGGAGAGTGAGAGAAACACAGGGACTAAGTCTACTAATAAAATATCAAATTCCTCTTCAACTCCTAAGCGACCTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTCCACCCCAAGTCACAAATTCTTAAAGAGTCATTAGTCAGTAATAAATTTGGTAATGTTCCAAAAAATGTTGATCAACGTAAAAATGAACAGAATCTTACAGCAAGGAAGCAAAATCATAAAGAGAACATGGCTGGAAATATTGCCACTACTACTAAGGTGGAGAAAAGAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACCGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATACTAATGCTCATAAAAACCATGTAAATAATGAACGGAGTATGCTCGAGCGTTTTGGTGGTAAAAACTATATAATAAGGTATGAGGGCTCTTTTAAAAATGGCAACAGCGACTGCTTTGTTTTAGAACATGTTCACCATGATAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTTCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACATTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAGCAAAGGCTATCTTATTGATTTTAACCTTGCCATGGATTTAAAGCAGAAGCACAACATTGGAAGTAAATCTAAACCAAGCCATGATGCAGCATCCAATATTGTTTCTTTCTCTTCTGGTTCTGCCCCTCTGGTCCGAGACAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAGCAAAAGGATTGTACCGGTCCTCTGAAAAATTGTCCTGATAAGGCTGGTGGGAGTTTTCTTAGAGCACAAGGAACAGATGGCTCTGGTGTAACTTCTGCGAAAGATCCTAGCACTAGGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCATGGAAGAAAGGAGCTTATCAGCTTTGTGAATACCATGAAATGTGCAAACAACAGTTCAACAATAGGCCCTTCTTCACAAAGGAAAAGGGTTACTGCTCCCTCAAGCAAGGTAGATGGCAAGATTTTTAATATTACTCCGATGCCTTTGCATTCATCTACTGTTGGTGGGGGATTAATGAGAAGCAAAGGTGATGGAAAGAAAAAAGAAGGTTCATGTGTTGGAACCAAAGGATTCCGTGCTCCGGAGGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACATGGTGATCGGGAAGACTCCTTTCACTGGCGACCCAGAACAGAATATAAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAATTATCTTTTCCAGTGGAGTTACTTGATGACCGATACTTACAGTCATGGGACTTAGAAGGCTGGTGCAAGATTCACACAAAGAGACCAGAGTTTCTTGAGCAGATCCCGAAATCGCTGTTTGATTTGATAGACAAGTGTCTAACAGTTAACCCAAGAAATAGGCTCAGTGCTGAAGATGTTCTAAGGCATGAATTCTTTGACTCACTGCATGAGTCCCTGAGGAAGCAAAGGATGCTTCATCGACATCGAGCTCTCAGGTCGGATGCAGCAGCTTCCAGAGCAATCTGA 2832 0.4297 MAESEFEPNRVHDLEEKSWHLLALLFRIGHAVYPQRLAAQCRLFAASPDFVCYVSTLPGSPLSVTDNGLVTPSVSAVFALGSFFSLRFSPPQTHRFRKRKLLFDSAEDGRERKRLAIRHGLREFSFQSFADAAEALMRSNFPVIKFESQNIGSGNFVFLLRIDKNEECSGCPMSNFEHRGANNDASTTMSNGEVSKSIIEVLTKKISIIKTSYLNCPKLVDKNRFMECNLFVVDPPCKEGIVNNLGIGKKIDYFDTFTHDCAEQNSIHHVDEDGIGKSNTCKDQPREPNEDDEVESGSKKGRIDSGTNRVKEDVAQRVNAALCGEALTNGLEQKNHVHAMNLEKESERNTGTKSTNKISNSSSTPKRPLKSSSILKGGQKNDLHPKSQILKESLVSNKFGNVPKNVDQRKNEQNLTARKQNHKENMAGNIATTTKVEKRAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHTNAHKNHVNNERSMLERFGGKNYIIRYEGSFKNGNSDCFVLEHVHHDRPEVLKKEIDIVQLQWYGYCMFRALYCLHKEGVVHRDIKPGNFLFSRKLSKGYLIDFNLAMDLKQKHNIGSKSKPSHDAASNIVSFSSGSAPLVRDKNLGGSKSLTSNKRALADYKNYSELNRHVKQKDCTGPLKNCPDKAGGSFLRAQGTDGSGVTSAKDPSTRTASAERLREPLPSHGRKELISFVNTMKCANNSSTIGPSSQRKRVTAPSSKVDGKIFNITPMPLHSSTVGGGLMRSKGDGKKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDRELSFPVELLDDRYLQSWDLEGWCKIHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHEFFDSLHESLRKQRMLHRHRALRSDAAASRAI* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0932 943 MobiDBLite consensus disorder prediction 667 698 - -
Gso3g0932 943 MobiDBLite consensus disorder prediction 272 311 - -
Gso3g0932 943 PANTHER CASEIN KINASE-RELATED 416 925 - -
Gso3g0932 943 MobiDBLite consensus disorder prediction 757 777 - -
Gso3g0932 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Gso3g0932 943 MobiDBLite consensus disorder prediction 342 384 - -
Gso3g0932 943 ProSiteProfiles Protein kinase domain profile. 447 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0932 943 Gene3D Transferase(Phosphotransferase) domain 1 759 940 - -
Gso3g0932 943 SMART serkin_6 447 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0932 943 Gene3D Transferase(Phosphotransferase) domain 1 406 603 - -
Gso3g0932 943 Pfam Protein kinase domain 449 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0932 943 Pfam Protein kinase domain 772 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0932 943 Coils Coil 405 425 - -
Gso3g0932 943 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 416 925 - -
Gso3g0932 943 SUPERFAMILY Protein kinase-like (PK-like) 445 926 IPR011009 -
Gso3g0932 943 MobiDBLite consensus disorder prediction 676 691 - -
Gso3g0932 943 MobiDBLite consensus disorder prediction 352 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0932 Gso-Chr3 33043400 33051151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0932 762 917 Core Cell Cycle Gene Families AT3G48750 31.288 1.44e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Gso3g0932 Pkinase 2.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0932 K02214 - gmx:100783107 1864.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0986 7 12655927 12663636 Gso3g0932 3 33043400 33051151 GST