Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0908 ATGCATCAGAAGAAATCCGAAGTCCAGATCGGAAAAGAAAGCAGTGGCGTCTCTTCCGATTTCAACCACCACCCACTCCCAATCCTAACTCCGAACCCAAACCAAGATGCTCTCCAATCACTAACCTCCACCGCACCCTACAAAAGACCTTCCCTCACCACCCAACCCCATCTTTCCAAATCCCCAACCCTCCACAAATTCCCAACCCTAAAACCACGCCACGTCACCACCACCACCGCCGCCGCCACCACCACCGTTCTCTCCCTCCTCCGCCGCCGCCTCCGCCACCGTCTCCGCCTCTTCCTCTTCCTCTTGCTCCCCTTCTTCTACTTCCTCGTCTCCCACCCCACAAACTCCTTCCTCCTCGATTTCCTCTCCGCCTTCTCCTTCTCCGCCGCGCTCTTGTTCTCTCTCAACCTCGCCCTCCCTCGAATCCCCTCCCTCCGCCTCTTCCTCAACCTCAAGCCCAAGGCTAGGTCCGGCCTCAAACTCCCAATCTTCTGGACCGTGGGAGCCCGCCCAGGCCCGGCCCAGGCCCAACCCCAGCCCGCGGGCCTTCGCTTATCCGTGGTGCCCTACGCGAACGGCGACGTGTACGAGGGGGAGCTGAAGGGAGGGAAGTGTTGTGGGAGTGGGGTTTACTATTACAGTATGAGTGGAAGGTATGAGGGGGATTGGGTGGATGGGAAGTACGATGGGTTCGGGGTGGAGACGTGGGCCCGGGGGAGCCGGTACCGAGGGCAGTACCGGCAAGGGTTACGGCACGGGTTCGGGGTGTACCGGTTCTACACCGGGGATGTTTATGCCGGGGAGTGGCTGAGTGGACAGAGTCATGGGTGTGGGGTTCACACGTGCGATGATGGGAGCAGGTATGTCGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACACTACCATTTTAGAAATGGCGATACATATGCTGGCGAATACTTTGCGGATAAGATGCATGGATTTGGGGTATACAGTTTTGCTAATGGCCATCGTTATGAAGGATCCTGGCATGAAGGCAAAAGGCAAGGTCTTGGAATGTATACATTTAGAAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACACAGAGTACCACCTATCCTGTTTCCCCTGTTGGGGTCAATCATTCCAGAGTACTTAATGCAGTCCAGGAAGCAAGAAGAGCAGCTGAGAAAGCCTATGATGTGGCCAAGGTAGATGAGAGGGTTAATAGAGCAGTAGCTGCCGCTAACAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAGGCCGTGCAAAACCAAATGCTTCATAATGTTAACAGCACGAGCATCCCAATTCCCATTGTGTGA 1368 0.5541 MHQKKSEVQIGKESSGVSSDFNHHPLPILTPNPNQDALQSLTSTAPYKRPSLTTQPHLSKSPTLHKFPTLKPRHVTTTTAAATTTVLSLLRRRLRHRLRLFLFLLLPFFYFLVSHPTNSFLLDFLSAFSFSAALLFSLNLALPRIPSLRLFLNLKPKARSGLKLPIFWTVGARPGPAQAQPQPAGLRLSVVPYANGDVYEGELKGGKCCGSGVYYYSMSGRYEGDWVDGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWLSGQSHGCGVHTCDDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYSFANGHRYEGSWHEGKRQGLGMYTFRNGETQSGHWQNGVLDIPSTQSTTYPVSPVGVNHSRVLNAVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQNQMLHNVNSTSIPIPIV* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0908 455 MobiDBLite consensus disorder prediction 1 35 - -
Gso3g0908 455 Pfam MORN repeat 245 267 IPR003409 -
Gso3g0908 455 Pfam MORN repeat 337 358 IPR003409 -
Gso3g0908 455 Pfam MORN repeat 291 313 IPR003409 -
Gso3g0908 455 Pfam MORN repeat 222 244 IPR003409 -
Gso3g0908 455 Pfam MORN repeat 268 290 IPR003409 -
Gso3g0908 455 Pfam MORN repeat 199 219 IPR003409 -
Gso3g0908 455 Pfam MORN repeat 314 336 IPR003409 -
Gso3g0908 455 PANTHER - 38 445 - -
Gso3g0908 455 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 286 370 - -
Gso3g0908 455 Gene3D - 320 384 - -
Gso3g0908 455 Gene3D - 274 319 - -
Gso3g0908 455 Gene3D - 188 228 - -
Gso3g0908 455 Gene3D - 229 273 - -
Gso3g0908 455 SMART morn 312 333 IPR003409 -
Gso3g0908 455 SMART morn 197 218 IPR003409 -
Gso3g0908 455 SMART morn 266 287 IPR003409 -
Gso3g0908 455 SMART morn 335 356 IPR003409 -
Gso3g0908 455 SMART morn 289 310 IPR003409 -
Gso3g0908 455 SMART morn 243 264 IPR003409 -
Gso3g0908 455 SMART morn 220 241 IPR003409 -
Gso3g0908 455 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 193 298 - -
Gso3g0908 455 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 38 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0908 Gso-Chr3 32543307 32549505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0908 193 370 Acyl Lipid Metabolism Gene Families AT1G60890 38.764 3.69e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0908 - - gmx:100784010 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0908 3 32543307 32549505 Gso8g2818 8 45906961 45911291 PCT