Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0902 ATGTCCTTCAATCAATCAAAGTCGGAGAAGAACGACGCGGTTTATCGAAAAACCGGGCGATCCGCCAGCTTCAATCAGCAGAGAGGAGGCTCCTATGGCAGGGGTGGCGGCGGCGGCGGGGCCGCGCCGTCGAGCAGTTCACTCTCCTTTAGCCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCCCCAGGGCATTCAACAGAGTCCAATAGTGCATCTACTGCCCAAACCATTAATGGTTCCCATGTACAGCCACAATTACATGGAGCATCAGATGGGCCAGCTACAAAGTCATCTGAATCACCAGCTGCTCATAGGAGTGCTGGAATTCTTCCAAAAGCTCCAACTTCTCTACAGGCCCCCTTGATTTCTGATCCACTCCCTCCCTCAAGCCCTGCTAAGGGAGATGCGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTACTCCTGGCTTTGTTAATGGGATGGCTATTCCTGCTCGTACAAGTTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACTCTTACAAATCTGTGCCTTCAGTGCCAATTCCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAAGATGCTGGCGTCTCTGAGCAATCTAATGCAGGGGACAGTTGGGAGAATCATCTAGGGTTTAAGGCAAAAAAGGATCCTCATGTGTCAGCTTTGACCCCGGCAAGCCAGATGCCTAAGTCCTCTGTTCCTGTAACTGGGATTTCAATGTCAACTCCATATCACCAGTCACAGGCTCCTTTACAGTTTGGCGGTGCTAATCCACAGATTCAATCTCAGGGTATGTCAGCGGCATCCCACCAGATGCCTATACCGATGCCTTTACCAATTGGCAATGCTACACAGGTGCAACAGCCAGTTTTTGTTCCAGGTCTTCAACCTCATCCAATGCATCCTCAGGGGATCAGGCATCAAGGCCAAAACATGAGTTTTGCTCCTCAAATGGGTCATCAGTTGCCCCATCAATTAGGTAGCATGGGCATTGGTATCGGCCCTCCATATCCCCAGCAGCAAGGAGGAAAATTTGCTGCTCCTCGAAAAACTACTGTAAAGATAACTCATCCTGAGACACACGAAGAGCTGAGGCTTGATAAAAGGACAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTAAGTCACCTGGTAAATCTTTTCCGGCTTCTCATCCTGCGAACTACTATTCTTCCAGCTCATACAATACCAATTCTCTCTATTATCCACCTAGTTCTCTTCCATTAACAAGTAACCCGATGTCTCCTAATTCTCAGCCACCAATATTTAATTTTACTGTGAATCATGGTCCGCAAGGCGTGAATTTCATGAATTCATCATCACGTGGTTCCCCATCTATTAATAAAGCTAGCACTCCAACAGAGGATGCATCTCTGACCATTAAGCCAAGTGGTACGTCTGCTATTGTGGACTCATCATTGTCCAATTCCAGTATTTCTGATGTTCAAAATACAGAATCCCCTAGTTCAACAGCATCTTGTGATGCTAGCTCCTCTGTGCTGCAAAAAGGGTCTGAAACTTGTTTGGAAATCTTTTTACAACAGCACAAGTTGTCTAGTGATTCTGTCCCAGTTGTGTCTAATAATGAAGGCAGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAAGAAACCAGGGAAGAAAGATCAATTATCACAGCATCAGGTTTCTGTACAATCTCCCACAGCGGATAATATGCCTTCTCATGCTGTTGACCATGGTATATCTGATACTGGAGTTTCCAAACCTGTAGGAACTAAAACAAACCATTCTGCGGAAATTACCACTGAAGACCTTCCAACATCTAATACAATACCTAGTAGCACTTCTACTGCTGAAGTGAAAACCAATGGGTCTGCAGAAGTTTCTACTTTTGTATCTGGTGCACAAACTGTTGACAGAGTGCACAATAGTAATCCTGATAAGATAGATGAATTAGCTGAAGGTAAACAACTAAAGCATTATGATGAAAGTGATGAGCCATCATCTCCTGAAGGATACAAATCAAATATGTACTTTAATGGAACAGAAATTAAACTAACTGAAAAAGATGCTGCAATTGTAAGCACTGTCTTAACAGGAATACTGGATGAATCTGCAAGTTATAATGCAAAATGTGTAATAGGTGATAATTTAGGGACATGTACTACTACCACATTGCATTATTCTAGGGATGTCTCTTTTAGAACAAATGATAGTGTAGTTACTAATAGATTTGTTTCAGGAAAATTTGGCATATCAGATCTGCAGTCTGCTGATCTTCCAGAGACAACATCAATGCATGTCAAGGATGCCTCAGAGAATACTGGCGGTGAGTCAGGTACCAAGGATAGACCAACTATAGAACCAAATAAGGTGAAAACTACATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATACAAGGGACCTGAGGAAATGAAAGAAGCTGTCTTAAGTTCTGAGAGCACAGAAAGTACCACCACTTTGAAGCAGTTGCCAAAAGATGCTGCTCAGTCAGATGCTTTAGCAAGTGAAAAGTGTGGTCACAGTAAAGCTGAACTCGATGACTGGGAGGATGCTGCTGACATGTCTACCCCCAAACTGGAGGTTCATGATAAATCTCAACAAGCTGGTGATGGAAGTGGAAGTACAGCCAAAAAGTATTCACGTGATTTCCTTCTGAAATTTGCAGAGCAGTGCATGGATCTTCCTGAAGGTTTTGAAGTCACCACAGACATTGAATCTTTGATGAGTGCCAATATTGGTAGTTCTCATGTTTTCGAGCGTGATTCACATCCTAGTCCTGGAAGAATTGTAGATAGACCAGGTGGGATGTCTCGGATGGATCGCCGTGGGGATGTGGTAATGGAGGATGACAGATGGAGTAGAGTTTCTGGTGCTTTTCGTTCTGGACGTGGTTTGGATGGCATTGGAGGTAATGTGGGATTCCGATCTGGCCAAGGAGGCAATTTTGGTGTCTTAAGGAACCCTCGTGCACAGACACCACCACAATATGTTGGAGGGATCCTTTCTGGGCCAATGCAATCAGTGGGAAATCATGGTGGAAGAAATAATCCTGATGGGGAGAGGTGGCAGCGTTCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACCCAAACTCCTTTACAGATGATGCACAAAGCTGAGAATAAGTATGAGGTGGGTAAAGCAACAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAGGCTATCTTGAACAAACTAACTCCGCAGAATTTTGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTTCATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAGATAACCTTTAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTGCTGAGGAAAGAGAAGAAAGAAGAGTTAAGGCTAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATACAAGAAGAAAATGTTGACAGAGAGAATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAAGAAGACATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGTACATATGGATGCATATTTTGAAAGGATGAAATTATTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAAGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGGGATGCCGCTCAGGAGAGGCAGGCCCAAGCTGGTAGGCCAGGTCGCGGTCTTGGTAACAATCAATCAGCTAGACGGAATCCCATGGATTTTGGTCCAAGAGGATCTATGCTGTCTTCTCCCAATTCTCAAATGGGTGGATTGCGTGGTCTTCCTACTCAAGTTCGTGGGTATGGTGCTTCTCAGGATGCTCGATTTGAGGAACGACAATCTTATGAGGCTAGGACCTTGTCGGTTCCTTTGCCTCAAAGACCCTTAGGAGATGATTCTATAAACTTGGTACCCCAAGGTGGTCTCGGTAGGGGAATGTCTACGAGAGGATCAACAGCAATTTCCAATTTGCCAATATCTGATGTGCTTCCTGTCCATGGAAACTCTCATAGAATGAATATAGGTCTTAATGGTCACAGCAATTTATCGGAGTGCACACCATATAGCTCAAGGGAGGATCTTGTTTCAAGATATGGTAATGTTAGGTCTTCAGGGCCATCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATGTAAACCATGATAACAGAGACTGGAGGAGTGCAGATCGGAATCTTGAACCTCCTGCTCATTTGCAAGGGTCAATGGTCTCTCAGAATGCTTCTTCAGAGAAGATTTGGCCAGAAGAACGACTGAGGGACATGTCCTTGTCAGCAATAAGAGAATACTACAGTGCTAGAGATGAGAACGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCGAGCTTCCATCCTTCCTTGGTTTCTCTCTGGGTCACGGATTCATTTGAGAGAAAGGATGCGGAAAGAGATCTTTTGGCCAAACTACTTGTCAACCTTGTGAAATCTCAGCATGGAACCTTGAATCAAGTTCAGCTCATTAAAGGGTTTGAATCTGCTCTCAGTACATTGGAGGATGCTGTTAATGATGCTCCCAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCAAAAGCCATAACAGAGAATGTAGTTTCTTTGAAGGAGATTGGGCAGTTAATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACTTTGGAGGTAATTCAAAGCGAGAAGGGGGACGCGGTTCTAAACGAGATGCGTTCAGACTCTAACTTGAGGTTGGAAACTTTCCGGCAACCTAATGCTAAAACATCAAGGAAGTTGGAAAAATTTATTTAG 5286 0.4378 MSFNQSKSEKNDAVYRKTGRSASFNQQRGGSYGRGGGGGGAAPSSSSLSFSRSFNKKSNNAQGGQSRVNPPGHSTESNSASTAQTINGSHVQPQLHGASDGPATKSSESPAAHRSAGILPKAPTSLQAPLISDPLPPSSPAKGDASKAFPFQFGSITPGFVNGMAIPARTSSAPPNLDEQKRDQALHDSYKSVPSVPIPPVPKQQQPPRKDAGVSEQSNAGDSWENHLGFKAKKDPHVSALTPASQMPKSSVPVTGISMSTPYHQSQAPLQFGGANPQIQSQGMSAASHQMPIPMPLPIGNATQVQQPVFVPGLQPHPMHPQGIRHQGQNMSFAPQMGHQLPHQLGSMGIGIGPPYPQQQGGKFAAPRKTTVKITHPETHEELRLDKRTDAYSDGGSSGARSHPNIPSKSPGKSFPASHPANYYSSSSYNTNSLYYPPSSLPLTSNPMSPNSQPPIFNFTVNHGPQGVNFMNSSSRGSPSINKASTPTEDASLTIKPSGTSAIVDSSLSNSSISDVQNTESPSSTASCDASSSVLQKGSETCLEIFLQQHKLSSDSVPVVSNNEGRRESLSRSNSLKDKKPGKKDQLSQHQVSVQSPTADNMPSHAVDHGISDTGVSKPVGTKTNHSAEITTEDLPTSNTIPSSTSTAEVKTNGSAEVSTFVSGAQTVDRVHNSNPDKIDELAEGKQLKHYDESDEPSSPEGYKSNMYFNGTEIKLTEKDAAIVSTVLTGILDESASYNAKCVIGDNLGTCTTTTLHYSRDVSFRTNDSVVTNRFVSGKFGISDLQSADLPETTSMHVKDASENTGGESGTKDRPTIEPNKVKTTSKGKKKRREILQKADAAGSTSDLYNAYKGPEEMKEAVLSSESTESTTTLKQLPKDAAQSDALASEKCGHSKAELDDWEDAADMSTPKLEVHDKSQQAGDGSGSTAKKYSRDFLLKFAEQCMDLPEGFEVTTDIESLMSANIGSSHVFERDSHPSPGRIVDRPGGMSRMDRRGDVVMEDDRWSRVSGAFRSGRGLDGIGGNVGFRSGQGGNFGVLRNPRAQTPPQYVGGILSGPMQSVGNHGGRNNPDGERWQRSASFQQRGLIPSPTQTPLQMMHKAENKYEVGKATDVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCFHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSAEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHMDAYFERMKLLSNNMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRPGRGLGNNQSARRNPMDFGPRGSMLSSPNSQMGGLRGLPTQVRGYGASQDARFEERQSYEARTLSVPLPQRPLGDDSINLVPQGGLGRGMSTRGSTAISNLPISDVLPVHGNSHRMNIGLNGHSNLSECTPYSSREDLVSRYGNVRSSGPSAYDQSSAPERNVNHDNRDWRSADRNLEPPAHLQGSMVSQNASSEKIWPEERLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSLVSLWVTDSFERKDAERDLLAKLLVNLVKSQHGTLNQVQLIKGFESALSTLEDAVNDAPRAAEFLGRIFAKAITENVVSLKEIGQLIHDGGEEPGSLLEVGLAADVLGSTLEVIQSEKGDAVLNEMRSDSNLRLETFRQPNAKTSRKLEKFI* 1762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0902 1761 MobiDBLite consensus disorder prediction 42 111 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 373 391 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1342 1365 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 794 811 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 210 224 - -
Gso3g0902 1761 Gene3D - 1119 1354 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1211 1235 - -
Gso3g0902 1761 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 113 1751 IPR045208 GO:0003743
Gso3g0902 1761 SMART if4_15 1119 1341 IPR003890 GO:0003723|GO:0005515
Gso3g0902 1761 ProSiteProfiles MI domain profile. 1573 1697 IPR003891 -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 395 412 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 909 929 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 587 602 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1532 1547 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 454 530 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 617 650 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 864 879 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 553 650 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 670 703 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 570 586 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 794 840 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 373 417 - -
Gso3g0902 1761 Gene3D - 1568 1761 - -
Gso3g0902 1761 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 113 1751 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1 227 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1514 1531 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1342 1406 - -
Gso3g0902 1761 SUPERFAMILY ARM repeat 1569 1759 IPR016024 -
Gso3g0902 1761 Coils Coil 1201 1233 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 859 895 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 553 569 - -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 673 699 - -
Gso3g0902 1761 Pfam MA3 domain 1579 1686 IPR003891 -
Gso3g0902 1761 Pfam MIF4G domain 1119 1341 IPR003890 GO:0003723|GO:0005515
Gso3g0902 1761 MobiDBLite consensus disorder prediction 971 994 - -
Gso3g0902 1761 SUPERFAMILY ARM repeat 1115 1343 IPR016024 -
Gso3g0902 1761 SMART ma3_7 1574 1688 IPR003891 -
Gso3g0902 1761 MobiDBLite consensus disorder prediction 1514 1565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0902 Gso-Chr3 32402398 32411260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0902 1 1760 Eukaryotic Initiation Factors Gene Family AT3G60240 46.747 0.0 1299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0902 K03260 - gmx:100819084 2785.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0902 3 32402398 32411260 Gso8g2815 8 45884729 45894598 PCT