Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0895 ATGAAGTGCTTTTACTATTTCAGAGACAAATCTAGGAGCAGTAAGCAAAGGTCAGCACCTGAACTTAAAGACCAAGAAAAACTCGAGTTATCAGGACCTGAAAGGGTCACCAAGTCTTCATGCTCATCTGCATCGCCTCGCGGTATACTGGAACTGTATGAGGAGAAGGGTCACAATTTGAGGAACTTCTCCTTCACAGAGCTCAAGCGTGCAACGAGTGATTTCAGCAGCCTTCTTAAGATAGGAGAAGGTGGATTTGGAAGTGTGTTTAAAGGTTCAATCAAGCCTGTTGACGGGAATGGGAATTCTGTTTTAGTTGCCATCAAAAGGCTTAACAAAAATGCATTACAGGGCCATAAGCAATGGTTGACTGAAGTTCAGTTTCTTGGTATTGTGGAACACCCAAATCTTGTCAAGCTTATTGGATACTGTGCTTTGGATGATGAAAGAGGGATCCAAAGACTACTAGTGTATGAATACATGCCGAACAAAAGCTTAGAATTTCATCTTTTCAATAAAGCATATGATCCTCTTCCTTGGAAAACAAGACTTGAAATAATTCTTGGAGCAGCTCAAGGGTTATCTTATCTGCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTTAAAGCTTCAAATGTATTACTGGATGAAAACTTTAAGCCAAAGCTTTCTGATTTCGGACTTGCAAGGGAGGGACCAGTAGCTGGTGATACTCATGTTTCAACAGCTGTGATGGGGACATATGGTTATGCTGCCCCTGATTACATTGAGACAGGCCATCTCACTGCCAAGAGTGATGTGTGGAGTTTTGGGGTGGTGCTATATGAAATACTTACTGGCAGGCGTTCAATGGAAAGAAACAGGCCGAAAACGGAGAAGAAACTACTGGAGTGGGTGAAGCAATATCCTCCTGATAGCAAAAGGTTTGACATGATAGTGGATCCGCGACTTCAAGGAGAATATTCCATTAAAGGAGCACGAAAAATCGCCAAACTTGCAGCACATTGCCTGCGTAAGAGTGCGAAAGATCGGCCATCAATGAGTCAGGTGGTAGAGAGATTGAAGCAGATAATCCTAGATTCTGATGAAGAGCAGCAGCCTGCAGATGATAAAAGTATTGAGGTATCTGAAAATGATCCGGTTGAAGCTGAAGATAAGACAAATCAATCAGGCTCTACAGAGTTATGGAAAAAGAGGATGGAACATCTTGCAAAACTTGGTGAAAGTGTGGAGAGTGCTAGTAGAAGAAGATTTATGATCCTTCAGAGAGCCAATGTGTCTTCATAG 1293 0.4176 MKCFYYFRDKSRSSKQRSAPELKDQEKLELSGPERVTKSSCSSASPRGILELYEEKGHNLRNFSFTELKRATSDFSSLLKIGEGGFGSVFKGSIKPVDGNGNSVLVAIKRLNKNALQGHKQWLTEVQFLGIVEHPNLVKLIGYCALDDERGIQRLLVYEYMPNKSLEFHLFNKAYDPLPWKTRLEIILGAAQGLSYLHEELEIQVIYRDFKASNVLLDENFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEILTGRRSMERNRPKTEKKLLEWVKQYPPDSKRFDMIVDPRLQGEYSIKGARKIAKLAAHCLRKSAKDRPSMSQVVERLKQIILDSDEEQQPADDKSIEVSENDPVEAEDKTNQSGSTELWKKRMEHLAKLGESVESASRRRFMILQRANVSS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0895 430 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
Gso3g0895 430 MobiDBLite consensus disorder prediction 361 386 - -
Gso3g0895 430 CDD STKc_IRAK 81 359 - -
Gso3g0895 430 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Gso3g0895 430 Gene3D Transferase(Phosphotransferase) domain 1 161 384 - -
Gso3g0895 430 PANTHER OS07G0495150 PROTEIN 22 418 - -
Gso3g0895 430 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Gso3g0895 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gso3g0895 430 MobiDBLite consensus disorder prediction 8 42 - -
Gso3g0895 430 MobiDBLite consensus disorder prediction 361 397 - -
Gso3g0895 430 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Gso3g0895 430 PANTHER OS01G0588500 PROTEIN-RELATED 22 418 - -
Gso3g0895 430 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0895 430 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0895 Gso-Chr3 32122180 32128963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0895 3 398 Glycoside Hydrolase AT3G07070 41.687 5.58e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso3g0895 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0895 - - gmx:100781858 853.588