Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0877 ATGGCATCAACGTTTCTCACCCTACCAACTCCCTTCCTACACAAAACCAATGCCATCAATTTCTCTAACAAGAGACCCTCATTTTTGCAGAGGAGCTCTCTGAAGATTCATGCAATTACCAAAAAATGGGAACCCACAAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAGGAGCTTTCAGATAAAACAGTTGGTGGAGTTTTGCTGCCTAAATCAGCTGTTAAATTTGAGCGCTATCTTGTGGGAGAAATCCTAACTGTTGGTGCTGAGGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAACACTGCTTCTGTAAAGCAAGTGACTTATTGGCCGTTGTGGAGTAG 405 0.4346 MASTFLTLPTPFLHKTNAINFSNKRPSFLQRSSLKIHAITKKWEPTKVVPQADRVLIRLEELSDKTVGGVLLPKSAVKFERYLVGEILTVGAEAGELKAGTKVLFTDMNAYEVDLGTDAKHCFCKASDLLAVVE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0877 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Gso3g0877 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Gso3g0877 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso3g0877 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 16 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso3g0877 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 16 133 - -
Gso3g0877 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso3g0877 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0877 Gso-Chr3 31672509 31676201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0877 15 134 Calmodulin-binding Proteins AT5G20720 27.273 2.04e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0877 K04078 - gmx:100306026 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1028 7 13916821 13921031 Gso3g0877 3 31672509 31676201 GST