Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0861 ATGCCTTTGGAGGACTTCTACAGGATATTTGGTGCCACAAAGCTCAAAAGTCCGTTTTGGACTTCATGGCAGCCCTTCGAATCACCATGCTTGTTGGAGCATGTAACTTTACCAGTGGAACTTGGGTTCTTTGTGATCTTGTTAGTCCAACTCCTAAGAAAATACATAAACCTTATCAGCAAGCAAAACAAGGTCACTGATAGTGCCAAAGAGATTGTGCATCCAACTGCAATCAAATTTGGTTTTGCTTACAAACTCAGCTTTGTTTGCACCACGTTGTTGTTGGTTGTTCATTCATCACTGCTATCACTGATTCTCAATCATGAGACTCAATGCACCTCGAAACTTCAGGCCTTCACATCAGAGATAGTTCAAGTGCTATCATGGGCAATTACTCTTGTAGCAATATGGAAGACATCAAAATCAAACACCTATTTCCCTTGGGTTCTGAGGGCTTGGTGGCTTTGCAATTTCATTTTGTGTATCATAAGCACAGCCCTTCAAGTCCACTTCAGTGTCACCAACAATGGTCAAATTGGCCTTAGAGAATGTGCAGATTTCCTTGGTTTTCTTGCTTCAACATGCCTTTTGGTTATTTCCACAAGAGGGAAGACAGGCACAGTGTTGCTTGCCACAAATGGTGCAGCATCTGAACCACTTCTAGGAGAGAAAGCTGAGAAAGAAAAACATTCAGAGTGTCAAAAGGAATCTCCATATGGAAAAGCCACTCTTCTCCAACTCATAAACTTCTCATGGCTCAACCCTTTGTTTGCAGTAGGGTATAAGAAACCCCTTGAGCAGATTGACATTCCTGATGTTGACATCAATGACTCTGCTGAGTTTCTAACATGCTCCTTTGATGAGAGCCTTAGGCAAGTCAAGGAGAAAGATGCCACTGCTAATCCATCTATCTACAAGGCAATCTACTTGTTTGCAAGGAAGAAAGCAGCAATCAATGCATTGTTTGCAGTGGTAAATGCTTCAGCTTCATATGTCGGTCCATACCTGATAACTGACTTTGTGGATTTCCTTGGAGAAAAGGGATCACACGGCTTGAAGAGTGGATACCTTCTGTCACTGGCTTTTCTGTGTGCCAAAATGGTTGAGACCATAGCTCAGAGGCAGTGGATTTTTGGTGCAAGGCAATTAGGCCTTCGCCTCAGAGCAGCGTTGATATCGCATATATATCAGAAGGGCCTGCATCTTTCAAGTAGATCGCGCCAAAGCCACACCGGCGGTGAGATAATGAACTACATGAGTGTGGATGTGCAGAGAATCACAGATTTTGTTTGGTATGTGAATGTGATATGGATGCTGCCTATTCAAATTTCTTTAGCAGTGTTCATTTTGCATACAAATCTAGGACTAGGTTCATTGGCTGCACTAGCTGCTACATTGGCAGTGATGACTTTGAACATTCCTCTAACAAAGATACAGAAAAGATACCAAGCCAAGATCATGGACGCCAAGGACAACAGAATGAAGGCCACTTCAGAAATCCTCAGAAACATGAGGACTTTGAAACTTCAAGCATGGGACAGACAATTTTCTCAAAGGATAGAAGGACTTAGGCAAATAGAGTACAATTGGTTAACGAAGTCACTGAGGCAAGCAGCATTTACTGCCTTCATCTTTTGGGGATCACCTACATTCATTTCTGTGATAACTTTTTGGGCATGCATGTTCATGGGGATTGAGCTGACAGCAGGAAGGGTCCTGTCGGCATTTGCCACGTTCCGAATGTTGCAGGATCCTATATTTAGCCTGCCTGATTTGCTCAATGTCATTGCTCAAGGAAAAGTTTCCGTCGATAGGATCGCTTCATTCCTCCGCGAGGAAGAAATCCAGCATGATGTCATTGAGAATGTTGCAAAGGACAAAACAGAATTTGACATAGTTATTCAGAAAGGGAGATTCAGCTGGGATCCCGAGTCAAAAACTCCAACCATTGATGAAATAGAGTTGAATGTTAAGAGGGGAATGAAGGTGGCAGTTTGTGGATCTGTAGGTTCTGGAAAGTCTAGTTTGCTATCAGGAATTTTGGGAGAAATATATAAACAATCTGGGACAGTGAAGATCAGTGGAACAAAGGCTTATGTGCCACAATCAGCATGGATACTGACTGGAAACATAAGGGACAACATTACCTTTGGAAAAGAGTACAACGGTGATAAGTATGAGAAGACTATTGAGGCTTGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGACATGACAGAGATTGGAGAGAGAGGGATTAACATGAGTGGGGGACAGAAGCAAAGGATTCAGATTGCTAGAGCAGTTTACCAGGATGCTGACATATACCTTTTTGATGACCCTTTCAGTGCTGTTGATGCTCACACTGGCACTCACCTCTTTAAGGAGTGCCTTATGGGGATTCTCAAAGAGAAAACTATAATTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATAGCACAAGCTGGAAAATTTAAAGATCTTCTAAAGCAAAATATAGGATTTGAAGTTTTAGTTGGTGCTCACAGCAAAGCTCTAGAGTCAATTATTGTGGCTGAAAATTCAAGTAGAACAAATTTAAACTCAATAGCTGAAGAAGGGGAATCTAACTTCAGCTCCAAGTCAAGTCATCAACATGACCACACACAACATGACACAGTGCAAGACAATCCTCCAGAGGGCAAAGGAAATGATGGAAAGTTGGTGCAAGAAGAGGAAAGAGAAACAGGAAGCATAGCAAAAGAAGTTTACTGGGAATATTTGACCACTGTCAAAGGGGGGATTTTGGTTCCTCTCATTCTCTTGGCACAGTCTTCATTCCAAATACTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCCACAAGTAGTGATGCTAAGCCTATATTTGACATGAATTTCATACTACTTATTTATATGGCCCTCTCAGTTGCTGGTTCATTTTGTGTTTTGCTCCGAGCCATGATGGTGTTAAATGCCGGACTTTGGACAGCACAAACATTTTTCACAAAGATGTTGCATAGCGTGCTCCGCGCCCCCATGGCATTTTTTGATTCTACACCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAGATGGCAAACAAAATAGGATGGTGTGCTTTCTCAATAATACAGATTCTAGGAACTATTGCAGTGATGTGTCAGGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACTGGAGTCTGCATATGGTATCAAAGATATTATACGCCAACAGCAAGAGAACTGGCTCGCCTTGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTCTAGCAGGAGCAGCATCAATACGAGCTTTCGATCAAGAGGGCCGTTTCATATACACAAATCTTCTCCTTGTTGATGGCTTCTCAAGGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGGTTGAATTTACTTTCAAATTTTGTTTTTGCCTTCTCACTGGTCATGCTAGTGAGCCTCCCTGAAGGAATAATCAATCCAAGTATTGCCGGGTTGGCAGTAACATATGGGATCAATCTGAATGTGTTGCAAGCTTCAGTTATATGGAACATATGCAATGCAGAAAACAAGATGATATCAGTTGAAAGGATCCTTCAATATACAAATATAACAAGTGAAGCACCTCTTGTGATTGAAGACAGCAGGCCGCCAAGCAACTGGCCAGATACTGGAACAATATGTTTCAAAAATTTGCAGATACGTTATGCCGAACATCTACCATCTGTATTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAGTTGGTGTTGTAGGACGTACCGGTAGTGGAAAATCAACACTCATACAAGCCATTTTCAGGATTGTTGAACCAAGAGAAGGAAGCATTATAATTGACAATGTGGACATATGCAAGATTGGTCTCCATGACTTAAGGTCAAGGCTTAGCATTATCCCACAAGACCCTGCCTTGTTTGAAGGCACTGTTAGAGGAAACCTGGATCCACTACAGAAATACTCTGACATTGAAGTGTGGGAGGCTCTAGATAAATGTCAGCTAGGTCACCTAGTAAGGGCCAAGGAAGAGAAGCTGGATTCCCCGGTGGTTGAAAATGGTGATAACTGGAGTGTGGGCCAAAGGCAATTATTTTGCCTTGGAAGAGCCTTGCTGAAGAGAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTGGATTCTGCAACTGATGGGGTGATACAGAACATCATAAGCCAAGAGTTCAAAGATAGGACTGTTGTCACAATAGCTCATAGAATCCACACAGTTATTGATAGCGATTTGGTTTTGGTTCTCAGTGATGGAAGAGTTGCTGAGTATGATGAACCATCAAAGTTACTTGAGAGAGAAGATTCCTTCTTCTTTAAACTTATAAAGGAGTATTCTGGAAGATCACATAACTTCAGCAACTTGGCAACTCAACATGTCCAAAGCAAGGAGCTATTATAG 4563 0.419 MPLEDFYRIFGATKLKSPFWTSWQPFESPCLLEHVTLPVELGFFVILLVQLLRKYINLISKQNKVTDSAKEIVHPTAIKFGFAYKLSFVCTTLLLVVHSSLLSLILNHETQCTSKLQAFTSEIVQVLSWAITLVAIWKTSKSNTYFPWVLRAWWLCNFILCIISTALQVHFSVTNNGQIGLRECADFLGFLASTCLLVISTRGKTGTVLLATNGAASEPLLGEKAEKEKHSECQKESPYGKATLLQLINFSWLNPLFAVGYKKPLEQIDIPDVDINDSAEFLTCSFDESLRQVKEKDATANPSIYKAIYLFARKKAAINALFAVVNASASYVGPYLITDFVDFLGEKGSHGLKSGYLLSLAFLCAKMVETIAQRQWIFGARQLGLRLRAALISHIYQKGLHLSSRSRQSHTGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILHTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQAKIMDAKDNRMKATSEILRNMRTLKLQAWDRQFSQRIEGLRQIEYNWLTKSLRQAAFTAFIFWGSPTFISVITFWACMFMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLREEEIQHDVIENVAKDKTEFDIVIQKGRFSWDPESKTPTIDEIELNVKRGMKVAVCGSVGSGKSSLLSGILGEIYKQSGTVKISGTKAYVPQSAWILTGNIRDNITFGKEYNGDKYEKTIEACALKKDFELFSCGDMTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLMGILKEKTIIFVTHQVEFLPAADLILVMQNGRIAQAGKFKDLLKQNIGFEVLVGAHSKALESIIVAENSSRTNLNSIAEEGESNFSSKSSHQHDHTQHDTVQDNPPEGKGNDGKLVQEEERETGSIAKEVYWEYLTTVKGGILVPLILLAQSSFQILQIASNYWMAWVCPTSSDAKPIFDMNFILLIYMALSVAGSFCVLLRAMMVLNAGLWTAQTFFTKMLHSVLRAPMAFFDSTPTGRILNRASTDQSVLDLEMANKIGWCAFSIIQILGTIAVMCQVAWQVFVIFIPVTGVCIWYQRYYTPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFIYTNLLLVDGFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVMLVSLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNITSEAPLVIEDSRPPSNWPDTGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPREGSIIIDNVDICKIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLQKYSDIEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQNIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRVAEYDEPSKLLEREDSFFFKLIKEYSGRSHNFSNLATQHVQSKELL* 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0861 1520 PANTHER - 90 1508 - -
Gso3g0861 1520 SMART AAA_5 1289 1481 IPR003593 -
Gso3g0861 1520 SMART AAA_5 659 832 IPR003593 -
Gso3g0861 1520 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 90 1508 - -
Gso3g0861 1520 CDD ABCC_MRP_domain2 1261 1481 - -
Gso3g0861 1520 SUPERFAMILY ABC transporter transmembrane region 313 614 IPR036640 GO:0005524|GO:0016021
Gso3g0861 1520 ProSitePatterns ABC transporters family signature. 757 771 IPR017871 GO:0005524
Gso3g0861 1520 SUPERFAMILY ABC transporter transmembrane region 932 1245 IPR036640 GO:0005524|GO:0016021
Gso3g0861 1520 Gene3D ABC transporter type 1, transmembrane domain 909 1244 IPR036640 GO:0005524|GO:0016021
Gso3g0861 1520 Gene3D ABC transporter type 1, transmembrane domain 289 616 IPR036640 GO:0005524|GO:0016021
Gso3g0861 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1265 1497 IPR003439 GO:0005524
Gso3g0861 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1254 1491 IPR027417 -
Gso3g0861 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 317 598 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g0861 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 627 848 IPR027417 -
Gso3g0861 1520 CDD ABC_6TM_ABCC_D1 318 606 IPR044746 GO:0140359
Gso3g0861 1520 CDD ABCC_MRP_domain1 632 832 - -
Gso3g0861 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 634 855 IPR003439 GO:0005524
Gso3g0861 1520 Gene3D - 1246 1498 IPR027417 -
Gso3g0861 1520 Gene3D - 630 861 IPR027417 -
Gso3g0861 1520 MobiDBLite consensus disorder prediction 886 902 - -
Gso3g0861 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 946 1226 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g0861 1520 CDD ABC_6TM_ABCC_D2 944 1238 IPR044726 GO:0140359
Gso3g0861 1520 Pfam ABC transporter 1280 1428 IPR003439 GO:0005524
Gso3g0861 1520 Pfam ABC transporter 651 784 IPR003439 GO:0005524
Gso3g0861 1520 Pfam ABC transporter transmembrane region 956 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g0861 1520 Pfam ABC transporter transmembrane region 318 581 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso3g0861 1520 Coils Coil 479 499 - -
Gso3g0861 1520 MobiDBLite consensus disorder prediction 879 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0861 Gso-Chr3 30856362 30869204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0861 611 846 Calmodulin-binding Proteins AT2G36910 30.435 9.80e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0861 - - gmx:100817486 2923.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1039 7 14297337 14311300 Gso3g0861 3 30856362 30869204 GST