Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0824 ATGAAACTGAGTGATATCATGAAGGCTACTAACAACTTCAGTAATACCAATATGATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGATGATGGCACGACACTTATGGTTAAGAGATTACAAGAATCTCAGTACACTGAAAAACAATTTATGTCTGAAATGGGTACGCTGGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAGGGAGAGGCTTTTAGTCTATAAAAATATGCCAAATGGAATCCTCCATGACCAACTTCATCCTGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCTGCCAAAGGTTTAGCATGGCTTCATCATAGCTGCAATCCCTGTATTATCCACCGAAACATTAGCTCGAAGTGCATGTTGTTGGATGCAGATTTTGAGCCGAAAATTTCTGATTTTGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCCACAACTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTCTATAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAGAACACCATGATGCCATTGATGAATCACTAGTCAGCAAGGATGCTGATAGCGAGCTTTTCCAATTTCTAAAGGTTGTATGCAACTGTGTCTCACCAACGCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGAGATATTGGTACCTACTGATATTGGTGATACTGATAAAATGGAGGAATTTATTGTAGCTCGAGAAGGAAGTTATTGA 978 0.409 MKLSDIMKATNNFSNTNMIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKQFMSEMGTLGTVKHRNLVPLLGFCMAKRERLLVYKNMPNGILHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPCIIHRNISSKCMLLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATTKGDIYSFGTVLLELVTGERPTNVYKAPETFKGNLVEWITELTSNAEHHDAIDESLVSKDADSELFQFLKVVCNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDEILVPTDIGDTDKMEEFIVAREGSY* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0824 325 ProSiteProfiles Protein kinase domain profile. 13 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0824 325 CDD STKc_IRAK 19 287 - -
Gso3g0824 325 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
Gso3g0824 325 Pfam Protein tyrosine and serine/threonine kinase 16 286 IPR001245 GO:0004672|GO:0006468
Gso3g0824 325 Gene3D Transferase(Phosphotransferase) domain 1 88 303 - -
Gso3g0824 325 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Gso3g0824 325 PANTHER RECEPTOR-LIKE PROTEIN 55 1 302 - -
Gso3g0824 325 PANTHER LRR RECEPTOR-LIKE KINASE 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0824 Gso-Chr3 30159204 30160181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0824 1 297 Receptor kinase-like Gene Family AT1G27190 52.349 6.03e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso3g0824 PK_Tyr_Ser-Thr 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0824 - - gsj:114405114 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0639 16 8196411 8199968 Gso3g0824 3 30159204 30160181 GST