Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0808 ATGTCTGGTGTAATGCGCTATATCTTTAAACCAATAAAAGCAGAAGATTTCATAGGTATTTGGCAATTTGCAGTAGTTGTAATGAAAGGTAAGATGCCAACTATGACAAAAGTAGTTGGAGATATCATTGAAGATCACAAAGAATTGTGTTGTGCATCATTTTCAAAAGAAGATAATAGGGATGAGAAAAACAATGATGGCAAGGAACATTTATCGATGAATACTGTGAACGAGGATGAACCTACTACCTCTAAGAATACCAAATTTGTTTGGACAAAAGACCTTCGATATCGATTTGAGGAAGCCATTAATATTCTTGGCCCAAAGAATGTAATTCCAACAAAAATTGTTCAAGTCATGAATGTTGAAGGGTTAAAAAGGAGAAATGTGGCAAGTCATCTGCAGGTTTGTTACTTTCATGGCAACTACTAA 432 0.3472 MSGVMRYIFKPIKAEDFIGIWQFAVVVMKGKMPTMTKVVGDIIEDHKELCCASFSKEDNRDEKNNDGKEHLSMNTVNEDEPTTSKNTKFVWTKDLRYRFEEAINILGPKNVIPTKIVQVMNVEGLKRRNVASHLQVCYFHGNY* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0808 143 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 55 135 IPR044841 GO:0003700|GO:0006355
Gso3g0808 143 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 55 135 - -
Gso3g0808 143 MobiDBLite consensus disorder prediction 55 75 - -
Gso3g0808 143 SUPERFAMILY Homeodomain-like 83 138 IPR009057 -
Gso3g0808 143 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Gso3g0808 143 MobiDBLite consensus disorder prediction 55 83 - -
Gso3g0808 143 Gene3D - 82 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0808 Gso-Chr3 28909774 28910674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0808 42 135 G2-like Transcription Factor Family AT5G59570 36.893 8.02e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso3g0808 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0808 - K14491 gsj:114405453 298.13