Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0806 ATGGATTTGGAAGCTGTGGCAGAGGCTGTTGAAAATTCTGCTGAAATAATATCAGCAGCATGTGAAGGCAGTTCCATTGAGGAGCCAAATGTTGGGATGGAGTTTCAGTCTGAAGAAGCTGCCAAGAACTTCTATGAAGAATATGCGAGACGGGAAGGGTTCGTTGTGCGCCTTGATCGCTGCCATCGTTCTGAGGTTGACAAGCAAATCATTTCACGCCGTTTTTCGTGCAATAAGCAAGGTTTTCATGTGAGGGTACGAAATAAAACCAAGCCTGTTCATAAACCACGGGCTAGCATAAGAGAAGGCTGTGAAGCTATGATGTATGTTAAAGTTAATACATGCGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAACACAGTCATCTGCTAAATGCTTCTGCTTTGCCTTATAATTCACTGATAGAGTCAAAGGATAGGATAATTCAACAACTCGCAAAGGAACTTGAGCACCAAGATCGATTATGTCAGCATTATCGCAGGCAGCTATTCTCCCTTCTGGAAACTGTTGACGAACAAACAAAATGTTTATCAACAAAAGTTGAACTTGTTGTTAACACCGTAAAAAAACTTGAGAATGAAGTACAAAAGCCTTTGATTTGA 624 0.4119 MDLEAVAEAVENSAEIISAACEGSSIEEPNVGMEFQSEEAAKNFYEEYARREGFVVRLDRCHRSEVDKQIISRRFSCNKQGFHVRVRNKTKPVHKPRASIREGCEAMMYVKVNTCGKWVVTKFVKEHSHLLNASALPYNSLIESKDRIIQQLAKELEHQDRLCQHYRRQLFSLLETVDEQTKCLSTKVELVVNTVKKLENEVQKPLI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0806 207 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
Gso3g0806 207 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 2 205 - -
Gso3g0806 207 Coils Coil 149 169 - -
Gso3g0806 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0806 Gso-Chr3 28876953 28880063 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso3g0806 FAR1 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0806 - - gmx:100802375 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2840 8 46092516 46096172 Gso3g0806 3 28876953 28880063 PCT
Gso3g0806 3 28876953 28880063 Gso8g2840 8 46092516 46096172 PCT