LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso3g0794	ATGGCTTCCTCTTTGCTTCTTTTTTTCCTCTTCTGCTCAGTGATTTTGCTACCCTTTGTTGTAGCTCAAACCAAAACCAACATAGCCATTGGTGATTCTCATACTGCAGGAAAAAGCACAACCCCATGGTTGGTTTCATCACCTTCTGGTGACTTTGCCTTTGGTTTCCTCCCACTTGAGGCCACTCCTGATCATTTCATACTTTGCATTTGGTATGCCAACATTCAAGACAGAACCATAGTTTGGTTTGCCAATAGGGACAACAAGCCTGCACCAAAGGGCTCAAAAGTTGAGCTTTCTGCTGATGATGGGTTGGTTCTCACTGCCCCAAATGGTGATAAGTTATGGAACACTGGTGGCTTCACTGCTAGAGTTTCTAGTGGTGTGTTCAATGACACTGGCAACCTTGTGCTTCTTGATGGTGCCTCCAGCAGTACTTGGGAGAGTTTTGATGATTATAGAGACACCTTGCTGCCTTCTCAGACTATGGAAAGGGGTCAGAAGCTTTCTTCTAAACTTAGGAGGAATGACTTCAACATTGGCAGGTTTGAGCTCTTTTTCCAAAATGATGGTAATCTTGTGATGCACTCTATAAATTTGCCATCTGAGTATGTTAATGCTAACTACTATGCAAGTGGAACCATTGAGTCCAACACATCAAGTGCTGGGACTCAATTGGTGTTTGATAGGTCAGGAGATGTGTATATTTTGAGAGACAACAAAGAAAAGTATAACTTGTCAGATGGGGGTTCTATTTCCACCACTCAATTTTACCTTAGAGCAACTCTTGATTTTGATGGGGTGTTCACACTCTATCAACATCCAAAGGGTTCTTCTGGGAGTGTAGGTTGGACCCCAGTGTGGTCTCATCCAGATAATATATGTAAGGATTATCTTTCTGCTGCAAGTAGTGGCGTTTGTGGATATAATAGCATTTGCAGTTTGGGAGATTATAAGAGGCCAATTTGTAAGTGTCCAAAATGGTACTCACTGGTTGATCCTAATGATCCTAATGGTAGCTGCAAACCGGATTTTGTACAATCATGTTCAGAAGATGAACTTAGTCAAAGAGAGGATCTATATGATTTTGAGGTGTTGATAGATACTGATTGGCCTCTTTCAGATTATGTGCTGCAAAAACCCTTCACTGAAGAACAATGCAGACAATCTTGTATGGAAGATTGTTTGTGTTCTGTTGCTATTTTCAGGTTAGGTGACAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGTAGAGTTGATGCCACACTTAATGGTGCAAAGGCCTTCATGAAAGTGAGGAAAGACAACTCCTCCTTGGTTGTTCCTCCAATCATTGTGAAAAAGAATAGTAGGAACACTTTGATTGTGCTTTTGAGTGGTTCTGCTTGTCTCAATCTAATATTGGTTGGAGCAATCTGCTTGAGCAGTTTTTATGTTTTTTGGTGCAAGAAGAAGCTTAGAAGAGTTGGCAAAAGTGGCACTAATGTGGAAACCAATTTGCGTTGCTTCACTTATGAGGAACTTGAAGAAGCTACCAATGGCTTTGAGAAAGTGCTAGGAAAGGGAGCTTTTGGTATTGTGTACGAAGGAGTCATCAACATGGGTTCCCTTACTCTCGTGGCAGTAAAAAGGTTGAACACTTTTCTCTTGGAAGAGGTTCAAAAGGAATTCAAGAATGAACTGAATGTCATTGGCCTCACTCATCATAAGAACTTGGTCCGTTTACTTGGATTTTGTGAGACTCAAGACGAAAGGTTGCTGGTTTATGAGTACATGAGCAATGGAACTTTAGCAAGTCTTGTTTTCAATGTGGAGAAACCAAGTTGGAAACTGAGGCTACAAATTGCAACTGGGGTTGCTAGAGGACTTCTATATCTGCATGAAGAGTGCAGCACACAGATCATCCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGATTACTATAATGCAAGAATTTCAGACTTTGGATTGGCCAAGATTTTGAACATGAATCAGAGCAGAACCAACACTGCCATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAAAACATGCCAATCACGGCCAAAGTGGATGTCTATAGTTATGGGGTGCTGCTACTTGAGATAGTTTCATGCAGAAAAAGTGTAGAATTTGAGGCAGATGAAGAGAAAGCAATCCTAACTGAATGGGCTTTTGACTGCTACACTGAAGGTGTTCTTCATGACTTGGTTGAGAATGACAAAGAGGCATTGGATGACATGAAGACCTTGGAGAAATTGGTGATGATTGCCCTTTGGTGTGTGCAAGAGGATCCTGGTCTTAGACCAACAATGAGAAATGTGACACAGATGCTTGAAGGTGTTGTTGAAGTCCAAATTCCACCATGCCCCTCCTCACAACTTAGTATTCAATGTTCTCTAGACTAA	2424	0.4138	MASSLLLFFLFCSVILLPFVVAQTKTNIAIGDSHTAGKSTTPWLVSSPSGDFAFGFLPLEATPDHFILCIWYANIQDRTIVWFANRDNKPAPKGSKVELSADDGLVLTAPNGDKLWNTGGFTARVSSGVFNDTGNLVLLDGASSSTWESFDDYRDTLLPSQTMERGQKLSSKLRRNDFNIGRFELFFQNDGNLVMHSINLPSEYVNANYYASGTIESNTSSAGTQLVFDRSGDVYILRDNKEKYNLSDGGSISTTQFYLRATLDFDGVFTLYQHPKGSSGSVGWTPVWSHPDNICKDYLSAASSGVCGYNSICSLGDYKRPICKCPKWYSLVDPNDPNGSCKPDFVQSCSEDELSQREDLYDFEVLIDTDWPLSDYVLQKPFTEEQCRQSCMEDCLCSVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFMKVRKDNSSLVVPPIIVKKNSRNTLIVLLSGSACLNLILVGAICLSSFYVFWCKKKLRRVGKSGTNVETNLRCFTYEELEEATNGFEKVLGKGAFGIVYEGVINMGSLTLVAVKRLNTFLLEEVQKEFKNELNVIGLTHHKNLVRLLGFCETQDERLLVYEYMSNGTLASLVFNVEKPSWKLRLQIATGVARGLLYLHEECSTQIIHCDIKPQNILLDDYYNARISDFGLAKILNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIVSCRKSVEFEADEEKAILTEWAFDCYTEGVLHDLVENDKEALDDMKTLEKLVMIALWCVQEDPGLRPTMRNVTQMLEGVVEVQIPPCPSSQLSIQCSLD*	808

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso3g0794	807	Pfam	Protein kinase domain	517	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso3g0794	807	SMART	serkin_6	514	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso3g0794	807	Gene3D	-	153	299	-	-
	Gso3g0794	807	ProSitePatterns	Protein kinases ATP-binding region signature.	520	544	IPR017441	GO:0005524
	Gso3g0794	807	ProSiteProfiles	Protein kinase domain profile.	514	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso3g0794	807	Gene3D	-	21	152	IPR036426	-
	Gso3g0794	807	SUPERFAMILY	alpha-D-mannose-specific plant lectins	66	214	IPR036426	-
	Gso3g0794	807	Gene3D	Transferase(Phosphotransferase) domain 1	593	792	-	-
	Gso3g0794	807	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1	21	799	-	-
	Gso3g0794	807	CDD	B_lectin	44	151	IPR001480	-
	Gso3g0794	807	Pfam	D-mannose binding lectin	79	167	IPR001480	-
	Gso3g0794	807	SUPERFAMILY	Protein kinase-like (PK-like)	498	785	IPR011009	-
	Gso3g0794	807	PIRSF	SRK	1	806	IPR024171	GO:0004674
	Gso3g0794	807	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	21	799	-	-
	Gso3g0794	807	SMART	blect_4	33	153	IPR001480	-
	Gso3g0794	807	Gene3D	Phosphorylase Kinase; domain 1	490	592	-	-
	Gso3g0794	807	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	635	647	IPR008271	GO:0004672\|GO:0006468
	Gso3g0794	807	ProSiteProfiles	Bulb-type lectin domain profile.	35	151	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso3g0794	Gso-Chr3	28631656	28634319	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso3g0794	500	801	Receptor kinase-like Gene Family	AT1G60800	41.304	2.50e-72	245

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Gso3g0794		Pkinase	3e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso3g0794	-		-	gmx:106798064	1639.01