Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0779 ATGAGCGACAGCGACACCCGCCAAAACGACATCACAAAGCCACTCGATTTGGAAAACCTGAGAGTCGTCTCGGCCGTGGGGCGCGGCGCCAAGGGCGTCGTGTTCCTCGCGAGAACCGGTGACCGGTCGTCGGAAGAATGCGTGGCGCTAAAGGTGATACCGAAGGCGCTGATTCTTCAGAAGGCGAAACTAATAAACGACGTGGAGTACACCAGGGTGTCGTTTGAAGAGCAGGTGCTACGTCGTTTCGATCATCTGCTTCTGCCTAGGTTAAGAGGGGTTTTCGAAACTGAGAAAGTCGTTGGTTTCGGTATTGATTACTGCCACGGTGGCACGCTCCATTCGCTTAGGAAGAAACAGACCGAGAAAATGTTCTCCGATGACACGATCAGGTTTTATGCAGTGGAATTGGTTCTCGCATTGGAGTATTTGCACAATTTGGGAATAGTGTATAGAGATCTGAAGCCAGAGAATGTGATGATTCAAGATAACGGTCACATAATGTTGGTTGATTTTGACCTCTCCAAAAAGCTAAACCCTAAATCCCCTCACTCACTGAGTCAAAACTCTTCCCCGAGTCCCAACTCGAAGACAAAACAAACTAGGAAGCAACGATTAATGCGTTTCTACAGTTTCTGCAACTCGGGAATCTTGCCCTGCGACTCGGACTCGGAGCCCCCACTCAGCAGCGTCAACTCAGTGCGTCACACCGAGTCCGACTTGGTTGAAAAATCAAACTCGTTCGTAGGAACAGAAGAGTATGTGGCACCAGAAATAGTCTCCGGAAAAGGTCACGGCTTCAGCGTTGATTGGTGGTCGTACGGTGTTGTTTTGTATGAGATGTTGTATGGAACAACGCCGTTTAAGGGCTCGAATAGGAAAGAGACATTTTACCGAATCTTAATGAAGGAGCCGGAGTTAACGGGGGAGAAGACGGCGTTACGGGATTTGATTGGGAAATTGTTGGAGAAAAATCCTGACCGTCGGATTCAGGTTAATGAAATCAAGGGCCACAATTTTTTCAAGGGGGTTAAGTGGGACACGGTGTTGCACATTGCGAGGCCACCTTATATTCCCGAAAATGAGGTTGAGAACAAAGTGGGGTTCAGCAAAAGCGACGTGGAAGTGTTCGTGGACAACGTGTTTTTTCCAACGGGTGATGATGGAGGAGAGAAAACAAAAACGCTGTTGGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAGTGTGGATTGACGAATTAAGTCATGTTCCCATTGGGAAGAAGAATGACGATTTTTTGATTTTTTGA 1314 0.4574 MSDSDTRQNDITKPLDLENLRVVSAVGRGAKGVVFLARTGDRSSEECVALKVIPKALILQKAKLINDVEYTRVSFEEQVLRRFDHLLLPRLRGVFETEKVVGFGIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHNLGIVYRDLKPENVMIQDNGHIMLVDFDLSKKLNPKSPHSLSQNSSPSPNSKTKQTRKQRLMRFYSFCNSGILPCDSDSEPPLSSVNSVRHTESDLVEKSNSFVGTEEYVAPEIVSGKGHGFSVDWWSYGVVLYEMLYGTTPFKGSNRKETFYRILMKEPELTGEKTALRDLIGKLLEKNPDRRIQVNEIKGHNFFKGVKWDTVLHIARPPYIPENEVENKVGFSKSDVEVFVDNVFFPTGDDGGEKTKTLLDNNNNNNNNNNNNNNNNNKVWIDELSHVPIGKKNDDFLIF* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0779 437 PANTHER FLIPPASE KINASE 1-RELATED 4 406 - -
Gso3g0779 437 SMART serkin_6 20 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0779 437 Gene3D Transferase(Phosphotransferase) domain 1 112 360 - -
Gso3g0779 437 ProSiteProfiles Protein kinase domain profile. 20 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0779 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Gso3g0779 437 MobiDBLite consensus disorder prediction 395 414 - -
Gso3g0779 437 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 4 406 - -
Gso3g0779 437 SUPERFAMILY Protein kinase-like (PK-like) 18 367 IPR011009 -
Gso3g0779 437 Pfam Protein kinase domain 244 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0779 437 Pfam Protein kinase domain 22 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0779 437 MobiDBLite consensus disorder prediction 180 200 - -
Gso3g0779 437 MobiDBLite consensus disorder prediction 389 414 - -
Gso3g0779 437 Gene3D Phosphorylase Kinase; domain 1 22 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0779 Gso-Chr3 28113268 28116443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0779 1 437 AGC Kinase Gene Family AT3G25250 54.751 8.62e-149 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso3g0779 Pkinase 4.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0779 K20714 - gmx:100785773 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2864 8 46315555 46317702 Gso3g0779 3 28113268 28116443 PCT
Gso3g0779 3 28113268 28116443 Gso8g2864 8 46315555 46317702 PCT