Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0775 ATGAGAATCTGGCTCAAGTCCCACAGCAGGAGGCAAAGGTGGGTTGACAAGTCATACAAGAAATCCCATCTTGGAATTGAATGGAAGAAACCTTTTGCTGGTTCATCCTATGCCAAGGGAATTGGCCTTGAAAAGATAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCCAAATTGTGTCAGGGTTCAACTTATCAAGAATTGGAAGAAGATTGCCGCTTTTGTCCCTAATGATGGTTGCTTGAACTACATTGAAGAGCATGATGAAGTCTTGATTGCTGGATTTGGACAAAAAGGTCATGCTATTTTCAATAGTTTCTCTCAAGTATTATGA 336 0.4137 MRIWLKSHSRRQRWVDKSYKKSHLGIEWKKPFAGSSYAKGIGLEKIGIEAKQPNSAIPNCVRVQLIKNWKKIAAFVPNDGCLNYIEEHDEVLIAGFGQKGHAIFNSFSQVL* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0775 111 Pfam Ribosomal protein S12/S23 24 103 IPR006032 GO:0003735|GO:0005840|GO:0006412
Gso3g0775 111 Gene3D - 17 105 IPR012340 -
Gso3g0775 111 PANTHER 40S RIBOSOMAL PROTEIN S23 5 103 - -
Gso3g0775 111 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 8 101 IPR006032 GO:0003735|GO:0005840|GO:0006412
Gso3g0775 111 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 5 103 IPR006032 GO:0003735|GO:0005840|GO:0006412
Gso3g0775 111 SUPERFAMILY Nucleic acid-binding proteins 12 99 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0775 Gso-Chr3 27948662 27950568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0775 12 103 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 86.957 6.61e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0775 K02973 - gmx:106798212 229.95